Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0127 ATGGAAGTTGCAAAAGCTTTGAAACCAACAACCTTACAGAGGGAGTTTATTTTCCAACAAGCATCGTGCATGGAGATTTTGTGTTTCAACGTTGTTAACCACAACGTTGTTGTTGGTGAAGATTTCTCTGTCGATGACCTATTTGACTTCTCCAACGGCAAAGGAGAAGAAAAAGAAGAAAAAGAAGAAGAGGATGAAGAAAAAGACAACGCCTCAAGTTCTTTAGAGTCACCGGACCGTACAGAAGATGATAGCAACTCCAAATCAACCACCACCGCTGGCTGTGACTCCATTTTCACCTCCGAATTGGTCGTTCCGGATGATGATTTGGCAGAACTAGAGTGGGTTTCTCATTTTGTAGATGATTCTCGACCAGAGCTTTCTCTTATGTACCAAGTCCCTTCAAAGCAACCACAGGTTTGGGTCGAACCGAAAACTGAACCGGGCTCATCATTAAAACTAACGTTTCTTCCTTCTGAAATTCCTACCAAGCCCAGAACCACCAAGTCTAGAAAGCCCAACACTCGTCTCTGGTTTTTTAACTCCGTCCTCTCCGGCGAGCCACCGGCGAAGAAGCAGAAGAGAAAGGCCGAGCCTGAAGCCAATAGGGTCCAGTTTCAGCGACAGTGCAGCCACTGCCAGGTTCAAAAAACGCCACAATGGAGGACCGGTCCACTTGGACCCAAAACCCTATGCAACGCTTGCGGGGTTCGGTTCAAGTCGGGTCGGCTTTTTCCAGAATATAGACCGGCTTGTAGCCCCACTTTTTCAGGTCATATTCATTCGAATAGTCATCGTAAAGTGTTAGAGATAAGGCGCAATAAGGAGGTGGATGAACCGGAGACATATTTGGACCGGGTTCAAATGGTTCCAAATTGTTGA 882 0.4626 MEVAKALKPTTLQREFIFQQASCMEILCFNVVNHNVVVGEDFSVDDLFDFSNGKGEEKEEKEEEDEEKDNASSSLESPDRTEDDSNSKSTTTAGCDSIFTSELVVPDDDLAELEWVSHFVDDSRPELSLMYQVPSKQPQVWVEPKTEPGSSLKLTFLPSEIPTKPRTTKSRKPNTRLWFFNSVLSGEPPAKKQKRKAEPEANRVQFQRQCSHCQVQKTPQWRTGPLGPKTLCNACGVRFKSGRLFPEYRPACSPTFSGHIHSNSHRKVLEIRRNKEVDEPETYLDRVQMVPNC* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0127 293 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 207 267 - -
Lan7g0127 293 ProSiteProfiles GATA-type zinc finger domain profile. 208 240 IPR000679 GO:0006355|GO:0043565
Lan7g0127 293 PANTHER GATA TRANSCRIPTION FACTOR 2 293 - -
Lan7g0127 293 ProSitePatterns GATA-type zinc finger domain. 210 235 IPR000679 GO:0006355|GO:0043565
Lan7g0127 293 MobiDBLite consensus disorder prediction 49 93 - -
Lan7g0127 293 PANTHER GATA TRANSCRIPTION FACTOR 2 293 - -
Lan7g0127 293 CDD ZnF_GATA 209 266 IPR000679 GO:0006355|GO:0043565
Lan7g0127 293 Pfam GATA zinc finger 210 243 IPR000679 GO:0006355|GO:0043565
Lan7g0127 293 Gene3D - 204 253 IPR013088 GO:0006355|GO:0008270
Lan7g0127 293 Coils Coil 54 74 - -
Lan7g0127 293 MobiDBLite consensus disorder prediction 71 86 - -
Lan7g0127 293 PIRSF Txn_fac_GATA_plant 18 291 IPR016679 GO:0003677|GO:0005634|GO:0045893
Lan7g0127 293 SMART GATA_3 204 258 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0127 Lan-Chr7 761074 762739 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0127 82 293 C2C2-Gata Transcription Factor Family AT5G66320 41.473 7.82e-53 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Lan7g0127 GATA 3.2e-16 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0127 - - adu:107476627 344.739
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0127 7 761074 762739 Lan13g0202 13 1262353 1263539 LSH