Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0120 ATGACGCTCTCCACCGGAAACAGCAGCAAGATCCGACGCATTGTCCGAATCCGGCAAATGCTCTTCCGGTGGCGCATCAAAGCGCGTGTCACTGCCACTCACGCGCCATCAGATGTTCCCGCAGGTTATATAGCAGTGTGTGTGGGACCTACAAGAAGCAGGTTTATCATACGCGCCACCTATCTGAACCACCCGATATTTGTGAACCTTTTGGCGGAAGCGGAAGAAGAATACGGTTTCTGTAACCATGGCCCACTCGCTGTACCGTGCGACGAGGAATATTTCAGAGAACTTCTTCGTGTCATGGCGCAACCGAAATGTTGCCACGTGGATGTGCGAAGCAGAAACAGAGAATCCTGGCCGTTGCTTCGAGATGACCCTATCTACTAA 390 0.5205 MTLSTGNSSKIRRIVRIRQMLFRWRIKARVTATHAPSDVPAGYIAVCVGPTRSRFIIRATYLNHPIFVNLLAEAEEEYGFCNHGPLAVPCDEEYFRELLRVMAQPKCCHVDVRSRNRESWPLLRDDPIY* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0120 129 Pfam Auxin responsive protein 17 101 IPR003676 GO:0009733
Lan7g0120 129 PANTHER SMALL AUXIN-UP RNA-RELATED 6 109 - -
Lan7g0120 129 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 109 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0120 Lan-Chr7 707527 708393 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0120 6 123 Calmodulin-binding Proteins AT4G34750 45.000 1.39e-36 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0120 K14488 - gmx:100795345 164.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0120 7 707527 708393 Lan13g0195 13 1219466 1220376 LSH