Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0110 ATGGGAAGGTCTCCTTGTTGTGAAAAAGCTCACACAAACAAAGGTGCATGGACTAAAGAAGAAGATGATAGACTTATATCTTATATTCGTGCTCATGGTGAAGGTAGTTGGCGCTCTCTTCCTAAAGCTGCTGGACTTCTCCGATGCGGCAAAAGCTGCCGTCTACGGTGGATTAATTACCTCCGTCCTGACCTCAAACGTGGCAACTTCACTGAAGAAGAAGATGAAGTTATCATCAAACTACATAGTCTCCTTGGTAACAAGTGGTCATTGATAGCTGGAAGATTACCGGGAAGAACAGATAATGAGATAAAGAATTATTGGAACACTCATATAAGAAGGAAGCTTATGAGCAGAGGAATTGATCCTGCAACTCATAGGCCTCTTAATGATGCTGATAATCCTGCTCAAGATCAAGAAATTCAACCATCTGTTGCAGTAACCAATACTATATCTTTTGCTTCATCTGCTTCTGCTGCTGCTGTTGTTGTTAAACAAGAACAAGATACTAGTATTACTAGCAAGTCAAGCATGTTTTGTGGTGTTGTCAAGATTAATAATAATAATAATAATAATGAAGATGGGAAAGGAACTATGTTAGAACATTGCCCTGACTTGAATCTTGAGTTAACAATTAGTCCTCCACGTTTGAATGAGAGTGATGAACCATTTAACATTGGTAACACTAGTAGTGGAATCAGGAATAACAGTACTGGTGCTAGTTATGATTTCCTGGGATTGAAAACTACTGGTGTTTGGGATTACAGAAGATTGGAAATGAAATGA 786 0.3868 MGRSPCCEKAHTNKGAWTKEEDDRLISYIRAHGEGSWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDEVIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLMSRGIDPATHRPLNDADNPAQDQEIQPSVAVTNTISFASSASAAAVVVKQEQDTSITSKSSMFCGVVKINNNNNNNEDGKGTMLEHCPDLNLELTISPPRLNESDEPFNIGNTSSGIRNNSTGASYDFLGLKTTGVWDYRRLEMK* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0110 261 CDD SANT 69 112 IPR001005 -
Lan7g0110 261 Gene3D - 69 142 - -
Lan7g0110 261 CDD SANT 16 61 IPR001005 -
Lan7g0110 261 SMART sant 13 63 IPR001005 -
Lan7g0110 261 SMART sant 66 114 IPR001005 -
Lan7g0110 261 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lan7g0110 261 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lan7g0110 261 PANTHER TRANSCRIPTION REPRESSOR MYB4 1 220 - -
Lan7g0110 261 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lan7g0110 261 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lan7g0110 261 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Lan7g0110 261 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lan7g0110 261 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
Lan7g0110 261 Gene3D - 14 66 - -
Lan7g0110 261 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0110 Lan-Chr7 598639 599915 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0110 1 261 MYB Transcription Factor Family AT4G38620 56.507 1.32e-98 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lan7g0110 Myb_DNA-binding 1.9e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0110 K09422 - gmx:778030 334.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0110 7 598639 599915 Lan8g1832 8 24740008 24741060 LSH
Lan7g0110 7 598639 599915 Lan13g0178 13 1086793 1088091 LSH