Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0095 ATGGGATCCTCCTTCATCAAACTCGATGACTCCCCAATGTTCCAGAAACAGTTATTTTCGCTCGAAGAAGCAGCTGATGAGTTAAAGGATCGGTGCCAGCAACTATTCAAAGGGTGCAACAAATTTATGGAAGCTTTGGGAGAAGCATATAATGGAGAAATTTCCTTTGCTGACTCGTTAGAAGTATTTAGCAGTGGCCAAGATGACCCTGTTAGTTTATCAATTGGAGGACCAGTGATATCTAAGTTTATTACCATACTGCGTGAGCTAGCTAGCTTTAAAGAGCTTCTTCGTTCACAGGTGGAGCACATGTTGATTGACCGGCTGACAGAGTTTATGACTGTTGATTTGCAAGACGTGAAGGATTCTCGCCAACGTTTTGACAAAGCTGTGCATTCTTATGATCAGTCACGAGAAAAGTTTGTGTCTTTGAAGAAAACTACACCAGGAGACATTGTCATTGAATCAGAAGAGGATCTACAAAATTCAAAGTCAGCATTTGAAAAAAGTCGCCTCAATCTAGTGAACTCTGTCATGAACATTGAAGTTAAAAAGAAGTATGAGTTCTTAGAGTCCGTTAGTGCAATAATGGATGCTCATCTGAGATACTTTAAGTTGGGTTATGACTTAATGAGCCAAATGGAGCCCTATATTCACCAGGTGCTAACATATGCTCATCAATCTAAAGAAATGGCTAATATTGAGCAAGATAAGCTTGAAAAACGAATCCTGGAATACCGAACACAGGCCGAGCTGGAAAATATACAAGCTTCCCACAATACAGAACCCTTGCCGGGTGCTGATGGAACCCATGTCATAGGCTTGAACTCTTACAAAAATTTTGATGCAGGGATGCAGTCTGCAGCCAAAGGGGAGGTTCAAACAGTTAAACAAGGCTATTTGTTGAAACAATCATTAAACTCGCGCGGAGGTTGGAATCGGAGGTTCTTTGTACTTGATAGTCGAGGGAGTTTATATTATTACAGAGTGAAGGGATGCAAACCCATGGGTCCTGGTGAACAAAACATTGGCATGTTTGGTAGATTTCGTTCAAGGCACAACATGGCAGCATCGCTAAATGAGGATATTTTGGAGTGTTGTGCAGTTGATCTCTGCACATCCACTATAAAGATGGATGCAGAGGATACAGATCTACGACTTTGCTTCCGTATAATTTCTCTCTCAAAATCATATACACTGCAGGCCGAAAATGAAGCTGATAGGATGGACTGGGTAAACAAAATAACTGGAGGCATCACATTGCTTTTTAATTCTCAGTTTCTTCAGCCTCATTATGATGGTAGATTACATTTCGAAAATAAAAACTCAGAAGGTGGTGCTTCCTTAGCTAGCCAATCAGAGGATGGTAATGGCATATATTCCAGGGAAGTGGTTAGTGTCTCTAAGATTTTGAGGGAAATTCCTGGGAATGGTATATGTGCTGAATGCAGTGCTCCTGAACCAGAATGGGCATCTTTAAATCATGGCATATTACTGTGTATTGAATGCTCTGGGGTGCATCGAAATATTGGAGTTCATATCTCGAAGGTAAGATCAGTAACATTAGACGTTAGAGTTTGGGAACCTACTGTTTTGGAGTTATTTGATAACTTGGGTAATGCTTATAGTAATTCTATCTGGGAGGGCTTGCTTGTAGTTGACGATGAAGGAGTAGCTGAGTCAAATGTGCCTACGAAACCATGCCCCACAGATGCCTTCCAATACAAGGAAAAGTACATTCAAGCAAAGTATGTAGAGAAATCACTAATCATCCGGGAAGAGGATATACCCGGGAATCCTTCACTTTCCATAAGAATCTGGCAAGCAGTTCAGGCTATAAATGTACGAGAAGTGTATCGCCTTATTGTTACATCAAATTCAAATCTGATAAACACAATATATGACGACGTGGTTCACCAAGCCGAGGCTAAAGATTTGAACTTAGGACCTATGAATGAAGGGCATCAGCACGATCCTGGAGAATGTCTGAGAATTAAAGAGACTAACGAGACTGATAGGTGTTTCCGTGGGTGGTCATTATTACATCTGGCATGTCATTCTGACAGTGCACTAATGATCGAGTTGTTGCTCCAATTTGGTGCCGATGTAAACATGTGTGACTATCATGGAAGGACTCCCTTGCACCATTGCATTTCTAGTGGGAAGAACCCATTGGCAAAGTTTCTATTGAGGAGGGGTGCTAAACCATCAATTAAAGATGCTGGTGGACTCACTGTACTTGAAAGAGCAATGGAAATGGGAGCAATAAATGATGAAGAGCTATTTATCAAGCTTGCTGAATGCCAGTAA 2310 0.4113 MGSSFIKLDDSPMFQKQLFSLEEAADELKDRCQQLFKGCNKFMEALGEAYNGEISFADSLEVFSSGQDDPVSLSIGGPVISKFITILRELASFKELLRSQVEHMLIDRLTEFMTVDLQDVKDSRQRFDKAVHSYDQSREKFVSLKKTTPGDIVIESEEDLQNSKSAFEKSRLNLVNSVMNIEVKKKYEFLESVSAIMDAHLRYFKLGYDLMSQMEPYIHQVLTYAHQSKEMANIEQDKLEKRILEYRTQAELENIQASHNTEPLPGADGTHVIGLNSYKNFDAGMQSAAKGEVQTVKQGYLLKQSLNSRGGWNRRFFVLDSRGSLYYYRVKGCKPMGPGEQNIGMFGRFRSRHNMAASLNEDILECCAVDLCTSTIKMDAEDTDLRLCFRIISLSKSYTLQAENEADRMDWVNKITGGITLLFNSQFLQPHYDGRLHFENKNSEGGASLASQSEDGNGIYSREVVSVSKILREIPGNGICAECSAPEPEWASLNHGILLCIECSGVHRNIGVHISKVRSVTLDVRVWEPTVLELFDNLGNAYSNSIWEGLLVVDDEGVAESNVPTKPCPTDAFQYKEKYIQAKYVEKSLIIREEDIPGNPSLSIRIWQAVQAINVREVYRLIVTSNSNLINTIYDDVVHQAEAKDLNLGPMNEGHQHDPGECLRIKETNETDRCFRGWSLLHLACHSDSALMIELLLQFGADVNMCDYHGRTPLHHCISSGKNPLAKFLLRRGAKPSIKDAGGLTVLERAMEMGAINDEELFIKLAECQ* 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0095 769 Pfam BAR domain of APPL family 8 233 - -
Lan7g0095 769 SUPERFAMILY PH domain-like 295 428 - -
Lan7g0095 769 ProSiteProfiles Ankyrin repeat profile. 676 708 IPR002110 GO:0005515
Lan7g0095 769 ProSiteProfiles Ankyrin repeat region circular profile. 709 740 - -
Lan7g0095 769 SUPERFAMILY Ankyrin repeat 669 764 IPR036770 -
Lan7g0095 769 Gene3D - 287 429 IPR011993 -
Lan7g0095 769 ProSiteProfiles PH domain profile. 294 420 IPR001849 -
Lan7g0095 769 ProSiteProfiles Ankyrin repeat profile. 709 741 IPR002110 GO:0005515
Lan7g0095 769 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD2 4 765 - -
Lan7g0095 769 Pfam PH domain 296 416 IPR001849 -
Lan7g0095 769 Pfam Putative GTPase activating protein for Arf 468 589 IPR001164 GO:0005096
Lan7g0095 769 SUPERFAMILY ArfGap/RecO-like zinc finger 468 590 IPR037278 -
Lan7g0095 769 SUPERFAMILY BAR/IMD domain-like 8 317 IPR027267 -
Lan7g0095 769 Gene3D Arf GTPase activating protein 453 596 IPR038508 -
Lan7g0095 769 CDD PH_ACAP 297 424 - -
Lan7g0095 769 Pfam Ankyrin repeats (3 copies) 671 740 IPR002110 GO:0005515
Lan7g0095 769 PANTHER CENTAURIN/ARF 4 765 IPR045258 GO:0005096
Lan7g0095 769 ProSiteProfiles Ankyrin repeat region circular profile. 676 707 - -
Lan7g0095 769 CDD BAR_SFC_plant 16 217 IPR035670 -
Lan7g0095 769 PRINTS HIV Rev interacting protein signature 477 496 IPR001164 GO:0005096
Lan7g0095 769 PRINTS HIV Rev interacting protein signature 496 513 IPR001164 GO:0005096
Lan7g0095 769 PRINTS HIV Rev interacting protein signature 519 540 IPR001164 GO:0005096
Lan7g0095 769 SMART 5bar 13 220 IPR004148 GO:0005515|GO:0005737
Lan7g0095 769 CDD ArfGap 469 584 - -
Lan7g0095 769 Gene3D - 664 765 IPR036770 -
Lan7g0095 769 SMART arf_gap_3 465 597 IPR001164 GO:0005096
Lan7g0095 769 SMART PH_update 295 422 IPR001849 -
Lan7g0095 769 Gene3D Arfaptin homology (AH) domain/BAR domain 7 253 IPR027267 -
Lan7g0095 769 ProSiteProfiles ARF GTPase-activating proteins domain profile. 465 597 IPR001164 GO:0005096
Lan7g0095 769 SMART ANK_2a 676 705 IPR002110 GO:0005515
Lan7g0095 769 SMART ANK_2a 709 738 IPR002110 GO:0005515
Lan7g0095 769 Coils Coil 229 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0095 Lan-Chr7 508987 517318 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0095 475 584 C2H2 Transcription Factor Family AT4G05330 41.441 1.61e-19 89.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0095 7 508987 517318 Lan13g0159 13 958250 968229 LSH