Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0091 ATGGCTCCAAAAAGAGGTGTAAAAGCTCCAGCACCTGCTAAGAAGAAAACCGAGACTGTTACGAATCCGCTATTTGAGAAGCGTCCGAAGCAGTTCGGAATCGGAGGAGCATTGCCTCCGAAGAGGGATTTGACAAGATTCGTGAAGTGGCCAAAGACTGTTCAACTTCAGAGGAAGAAGAGGATCCTTAAGCAGAGGTTGAAGGTTCCACCTGCATTGAACCAGTTCACAAAGACCTTAGACAAGAACCTCGCAACAAGCCTGTTCAAGATACTTCTGAAGTACAGGCCTGAGGACAAGGCAGAGAAGAAGGAAAGGCTTTTGAAAAGGGCTCAGGCCGAAGCTGATGGCAAGCCTCTTGAAGGAAAGAAACCTATCGTTGTGAAGTATGGTCTCAACCATGTTACCTACCTTATTGAGCAGAATAAGGCACAGCTGGTTGTGATTGCTCATGATGTGGACCCAATTGAATTGGTTGTCTGGCTCCCTGCACTGTGCAGGAAGATGGAAATCCCGTACTGCATCGTTAAGGGCAAGGCTCGCCTCGGAACGGTTGTCCACAAGAAAACTGCATCTGTTTTGGCCTTGACAACTGTTAAGAATGAAGACAAATTGGAGTTCAGCAGAGTCCTGGAGGCTATTAAGGCCAACTTCAATGACAAGTATGATGAGTACAGGAAGAAGTGGGGCGGTGGCATCATGGGTTCAAAGTCCCAAGCCAAGACCAAGGCTAAGGAAAGGGTTATCGCCAAGGAAGCAGCTCAGAGGCTGACTTAG 777 0.4788 MAPKRGVKAPAPAKKKTETVTNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKTVQLQRKKRILKQRLKVPPALNQFTKTLDKNLATSLFKILLKYRPEDKAEKKERLLKRAQAEADGKPLEGKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGTVVHKKTASVLALTTVKNEDKLEFSRVLEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKERVIAKEAAQRLT* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0091 258 PRINTS Ribosomal protein L7A/RS6 family signature 128 142 IPR018492 -
Lan7g0091 258 PRINTS Ribosomal protein L7A/RS6 family signature 147 160 IPR018492 -
Lan7g0091 258 PRINTS Ribosomal protein L7A/RS6 family signature 163 173 IPR018492 -
Lan7g0091 258 PRINTS Ribosomal protein L7A/RS6 family signature 173 187 IPR018492 -
Lan7g0091 258 PANTHER BNAA03G47020D PROTEIN 2 256 - -
Lan7g0091 258 ProSitePatterns Ribosomal protein L7Ae signature. 166 183 IPR004037 GO:0042254|GO:1990904
Lan7g0091 258 MobiDBLite consensus disorder prediction 1 21 - -
Lan7g0091 258 Gene3D - 50 233 IPR029064 -
Lan7g0091 258 SUPERFAMILY L30e-like 89 223 IPR029064 -
Lan7g0091 258 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 2 256 - -
Lan7g0091 258 PRINTS Ribosomal protein L7A family signature 29 46 IPR001921 -
Lan7g0091 258 PRINTS Ribosomal protein L7A family signature 46 63 IPR001921 -
Lan7g0091 258 PRINTS Ribosomal protein L7A family signature 66 85 IPR001921 -
Lan7g0091 258 PRINTS Ribosomal protein L7A family signature 90 103 IPR001921 -
Lan7g0091 258 PRINTS Ribosomal protein L7A family signature 124 144 IPR001921 -
Lan7g0091 258 PRINTS Ribosomal protein L7A family signature 185 209 IPR001921 -
Lan7g0091 258 PRINTS Ribosomal protein L7A family signature 217 237 IPR001921 -
Lan7g0091 258 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 123 205 IPR004038 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0091 Lan-Chr7 492383 494570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0091 1 258 Cytoplasmic Ribosomal Protein Gene Family AT3G62870 86.434 3.53e-167 460
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0091 K02936 - gmx:100792324 459.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0091 7 492383 494570 Lan8g1844 8 24810633 24812782 LSH
Lan7g0091 7 492383 494570 Lan13g0154 13 935207 937297 LSH