Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0087 ATGATTCTCCAACCAATGAAGATTTTCTCTTCTACCCTCTGTCCTTGCACCAATGAAGTTAATCACTTTGTTGCTTCCCCTTTGTCCCGAAGAAGAAGAAGAAAACGTTTCATTGCGCATTCTGGGTGTAGGAATTCCCGAAGAAAATTCACCCTTCGTTTCTGTGCTATTCCCCCAGATAATAATAGTTCCAACCGAATTCGGAACACGGAATTCGCAAATTCAACTACAAGGGGTGCCAAAAGTTTCGTTTTTAATCAGATTAGTAATGAAATTGACGAGGATAATGAACATGGCGTGTCTCCTTCTCAAGAGTCACAGCAGATTCAGTTAGGGTCAAATTTCACCAATTTTCAAGAAGACCCTATTGTAGATAAGTTAAGAACACAATTGGGGGTGATTCACCCAATTCCATCGCCTCCTATTAACCGCAACGTGGCTGGTTTATTTGTGTTCTTTTTCTTTGTCGGCGTTGTGTTTGATAAATTGTGGTCTTCAAGGAGAAGGAACAAAGTTAGCAGTGAAGATAGCTTGCGTGGCGTGTGGCCACAGGTGCCAACAAGCTTCTCTTTGTTTTTGGAAAAGGATTTGCAGAGAAAAGAATCAGTGGAATGGGTGAATATGGTGCTTGGGAAGTTATGGAAGGTTTATAGAGGTGGAATTGAGAACTGGATTATTGGGTCGCTTCAGCCTGTTATTGATGACTTGAAGAAACCTGATTATGTGGAAAGGGTTGAGATTAAGCAATTCTCATTAGGGGATGAACCATTGTCTGTTAGGAATGTTGAACGCAGGACTTCTCGCCGTGTCAACGATTTGCAGTACCAGATAGGAGTTAGGTATACTGGTGGTGCTCGTATGCTATTAATGCTTTCTCTAAAATTTGGCATTATTCCAATTGTGGTGCCTGTTGGTGTTCGAGATTTTGACATTGATGGCGAGCTTTGGGTAAAATTGCGATTAATACCTACAGAACCCTGGGTGGGAGCTGCATCATGGGCTTTTGTTTCTCTTCCAAAGATCAAGTTTGAATTGTCTCCATTCCGTCTGTTCAATTTAATGGCAATTCCAGTACTCTCAATGTTTTTGACAAGACTTCTCACTGAAGATTTACCCAGACTATTTGTACGCCCAAAGAAAATTGTTTTGGATTTCCAAAAGGGAAAAGCAGTTGGTCCGGTTGCAAACGATGTTAAATCTGGAGAGATGCAAGATGGAAACAAAGATTCTGTCGGTGAACTATCTGTTACCCTTGTGGATGCTCGAAAGCTTTCTTATCTCTTCTATGGCAAGACAGATCCTTATGTTATTCTCAGTCTTGGAAATCAAACTATACGCAGCAAAAAGAACAGCCAGACTACTGTCATTGGGCCTCCTGGAATGCCAATTTGGAACCAAGATTTTCATATGCTTGTCGCCAACCCTAAAAAGCAGAAGTTACTTGTCCAGGTTAAGGACTCTCTGGGATTTGCAGATTTGACTATTGGTACAGGGGAGGTTGATTTGGCATCTCTTAAAGACACTGTACCAACAGACAGGATTGTGGTTCTACAAGGTGGTTGGGGAATTTTAGGAAAGGGTTCTTCCGGCGAGATATTACTACGGCTAACATATAAAGCATATGTGGAGGATGAAGAAGATGACAAGACTGAGGTGAATGCCATTTATGTAGATGCTTCAGATGATGAGTTGTCTGATTCAGAAGAAGCAAATGTCACTGATGAGAAGAATGAAGGAGATCCTATGTACCGAACTGATAATGAGTCATTTATGGATGTATTAGCAGCATTAATTGTAAGTGAGGAATTCCAAGGAATAGTGGCATCTGAAACTGGGTCTACCAAAAATTTGGATTATAGCTCAAATACAGGCTCCAAAGTATCAAAGTCTACTGTTGCCAATGCTGAAACAATTTCTTCTACTTCTGACAACTCTCAAGGTTTTGTAGGGTCAGCATTATTTTGGTTTGCTGTGATTACTAGTATATCACTACTAATTGCAATCAACATTGGCGGTTCAAGTTACTTCAATCCTTGA 2037 0.407 MILQPMKIFSSTLCPCTNEVNHFVASPLSRRRRRKRFIAHSGCRNSRRKFTLRFCAIPPDNNSSNRIRNTEFANSTTRGAKSFVFNQISNEIDEDNEHGVSPSQESQQIQLGSNFTNFQEDPIVDKLRTQLGVIHPIPSPPINRNVAGLFVFFFFVGVVFDKLWSSRRRNKVSSEDSLRGVWPQVPTSFSLFLEKDLQRKESVEWVNMVLGKLWKVYRGGIENWIIGSLQPVIDDLKKPDYVERVEIKQFSLGDEPLSVRNVERRTSRRVNDLQYQIGVRYTGGARMLLMLSLKFGIIPIVVPVGVRDFDIDGELWVKLRLIPTEPWVGAASWAFVSLPKIKFELSPFRLFNLMAIPVLSMFLTRLLTEDLPRLFVRPKKIVLDFQKGKAVGPVANDVKSGEMQDGNKDSVGELSVTLVDARKLSYLFYGKTDPYVILSLGNQTIRSKKNSQTTVIGPPGMPIWNQDFHMLVANPKKQKLLVQVKDSLGFADLTIGTGEVDLASLKDTVPTDRIVVLQGGWGILGKGSSGEILLRLTYKAYVEDEEDDKTEVNAIYVDASDDELSDSEEANVTDEKNEGDPMYRTDNESFMDVLAALIVSEEFQGIVASETGSTKNLDYSSNTGSKVSKSTVANAETISSTSDNSQGFVGSALFWFAVITSISLLIAINIGGSSYFNP* 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0087 678 Pfam C2 domain 412 508 IPR000008 -
Lan7g0087 678 MobiDBLite consensus disorder prediction 560 584 - -
Lan7g0087 678 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 412 540 IPR035892 -
Lan7g0087 678 MobiDBLite consensus disorder prediction 570 584 - -
Lan7g0087 678 Gene3D C2 domain 393 541 IPR035892 -
Lan7g0087 678 ProSiteProfiles C2 domain profile. 399 515 IPR000008 -
Lan7g0087 678 SMART C2_3c 413 514 IPR000008 -
Lan7g0087 678 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 199 386 IPR031468 GO:0008289
Lan7g0087 678 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 20 678 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0087 Lan-Chr7 468238 473993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0087 429 549 Acyl Lipid Metabolism Gene Families AT4G13550 29.508 2.99e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0087 - - adu:107477171 1020.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0087 7 468238 473993 Lan8g1845 8 24813542 24819559 LSH
Lan7g0087 7 468238 473993 Lan13g0151 13 908448 913943 LSH