Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0082 ATGTACTTTAGGAGAATACAGGGCAGAGATCGGAGATGGGCTTTAGTGTTGCAGCCATGCTTTTTCAGGCCAAGATTCTCCGGTTATGCAGCCTTTCGATCTTTATCCTCCAAGACCACTTTGAAAGAATACGTGTCACATTGTAGTATCATCAGAAGACATCTTTTTGGTTCATATTCATCGGGGTGTGCTTCGTCTTCAAATAGTTCTATTGGTCTGGATAGAAGGCCTACTTTATGGAGTACACATCTACGTGCTTATAGTTCTGAGAGTGGTGGGAGAAATGCAAGTGAGGATAAGCATGTACATGTCAATGATGGAGCTAATCTTGATAAGGGACAAAATCGGCAAGAGATGTTGGGGAAAGATGTCAAGTGCTGCAATGCACATTCACATGCACAGATAGGAGAACAAGATCAACAGGAATGGCTTAATAATGAGAAGCTTTCCATAGAAAGTAAAAAGAGAGAATCACCATTTTTGACAAGAAGGGATAAGTTTAAAAACGAGTTTCTCAGAAGAATTGTTCCGTGGGAGAAGATTAACATTTCATGGGACACATTTCCTTATCACATTAATGAACATACAAAAAATCTTCTGGTGGAATGTGCTGCTTCCCATCTGAGACACAACAAGTTTGCTTCTTCTTTTGGCACTCGCCTTACATCTTCAAGTGGGAGAATATTGCTTCAGAGCATTCCTGGCACTGAGCTCTATCGTGAGAGAGTAGTTAGAGCTCTTGCACAAGATTTACAAGTTCCTTTGTTGGTGCTTGATTGCAGCATCATTGCTCCTTATGATATGGATGATGATTTATCAGACTACGAGTCTGATGATGATAATGCAGACTCGGGGGAAGAAGGTTCAATAGAGTCAGAGAACGAGGATGACAATGATGCTAGTAATGAAGAAGAGTGGGCTAGCAGTAACGAGGTAAAGTCAGATGCAAGTGATAATGATGATGCACTTGCACATGCTGAGGCAGCTCTTAAGAAGGTTAAAGCAGCTGTTCAGAAACTTGTTCCTTACAACATTGAAGAATTTGAGAAGATTGCGTCCGCAGGATCAGAGAGTACTGATTCATCTAAGTTCAGTGATGCCAAGTCTTCTGATAAATCTGGGTGCCAGCTAAGAAAAGGTGACCGTGTGAAGTACATTGGGCCATCTGTTCAAGTTACAGCTGACGATAGGCCTTTAACCAGCGGTCAGAGAGGAGAGGTATATGAGATGAATGAAGATCAAGATCGAGTTGCTGTCATCTTGGACATTAATGAAGACAGTGCCAATGAGGGCGAGGTGGAGAACCTTAATGACAAGCATAGAAAACCAGCGATTTATTGGATACATGTTAAGGACATTGAGAAAGATCTTGATGCACAAGCACAAGATTGCTACATAGCGGTGGAGGCTTTATGTGAGGTTCTGAAATCCAGACAACCTCTTATTGTCTATTTTCCAGACAGCTCACAGTGGCTGCATAAATCTGTTCCTAAGTCAAACCGAAAGGAGTTTTTTCATAAGGTCGAAGAGATGTTTGACAAGTTATGTGGTCCTGTGGTGTTGATTTGTGGGCAAAACAGAGTCCAGTCAGGATCAAAGGAAAAAGATCAATTTACAATGATACTTCCAAACTTAGGACGTGTTGCTAAGCTGCCTTTGTCTCTGAAACGGCTGACTGACGGATTTAAAGGGGCAAAGAGCTCGGAAGATGATGAAATTCACAAGCTTTTCTCTAATGTTTTGTGTGTACATCCACCTAAGGATGATAATCTGCTGACAACATTTAAGAAACAACTTGATGAAGACAGGAAAATTGTGATTTCACGTAGCAATTTGAATGAACTACGGAATGTTCTTGAAGAGCATCAGCTATCATGCACAGACCTATTGCATGTAAATACGGATGATGTCATTTTGACAAAGCAAAAAGCTGAAAAGGTTGTAGGCTGGGCAAAAAATCATTACTTGTCATCATGCCTGCTTCCTTCTGTTAAAGGAGAACGATTGTGCCTCCCTCGTGAAAGTCTTGAAATTGCAATCTCAAGGATGAAGGGCCAAGAAACTTTATCACGGAAACCTTCTCAGAACCTCAAGAGCCTTGCAAAGGATGAGTTTGAGAGCAATTTCATTTCAGCCGTAGTACCTTCAGATGAAATTGGGGTGAAGTTTGATGACATAGGTGCTCTTGAAGATGTGAAGAAGGCACTTAATGAGCTTGTTATTCTTCCAATGAGAAGGCCAGAGCTTTTCTCTCGTGGAAACTTGTTGCGGCCTTGCAAAGGGATATTACTCTTTGGTCCTCCTGGAACTGGGAAAACTCTACTGGCCAAGGCATTGGCAACAGAAGCTGGTGCAAATTTTATCAGCATAACTGGTTCAACTCTTACTTCAAAGTGGTTTGGAGATGCTGAAAAACTAACTAAAGCCCTTTTCTCCTTTGCCAGCAAGCTTGCTCCTGTCATTATATTTGTTGATGAAGTTGACAGTTTGCTGGGTGCTCGAGGTGGTTCTTTTGAACATGAGGCCACTAGAAGAATGAGAAATGAGTTCATGGCAGCTTGGGATGGATTGAGGTCAAAAGAGAACCAAAGAATCCTCATTCTTGGTGCAACAAACCGACCATTCGACCTTGATGATGCTGTTATTCGTCGTTTACCAAGAAGGATATATATTGATTTACCAGATGCTGAAAATCGAATGAAGATTTTGAGAATAGTCCTTGCACAAGAAAATTTGGTTCCTGATTTTGAGTATGATAAACTTGCTAAGTTGACTGAAGGATACTCTGGCAGCGATTTGAAGAACCTTTGTATTGCTGCTGCATATAGACCTGTTCAAGAGCTCATAGAGGAAGAGGAAAAGGGAGGCAATAATGGTATATCTTCGGTATTAAGGGCTCTTAATGTAGATGATTTTGTTGAGTCAAAAGCTAAGGTGGGGCCATCAGTTGCATATGATGCAACAAGCATGAATGAGTTGAGGAAGTGGAATGAAATGTATGGAGAAGGTGGTAGTAGGACAAAGTCACCATTTGGATTTGGAAGCTGA 3048 0.4131 MYFRRIQGRDRRWALVLQPCFFRPRFSGYAAFRSLSSKTTLKEYVSHCSIIRRHLFGSYSSGCASSSNSSIGLDRRPTLWSTHLRAYSSESGGRNASEDKHVHVNDGANLDKGQNRQEMLGKDVKCCNAHSHAQIGEQDQQEWLNNEKLSIESKKRESPFLTRRDKFKNEFLRRIVPWEKINISWDTFPYHINEHTKNLLVECAASHLRHNKFASSFGTRLTSSSGRILLQSIPGTELYRERVVRALAQDLQVPLLVLDCSIIAPYDMDDDLSDYESDDDNADSGEEGSIESENEDDNDASNEEEWASSNEVKSDASDNDDALAHAEAALKKVKAAVQKLVPYNIEEFEKIASAGSESTDSSKFSDAKSSDKSGCQLRKGDRVKYIGPSVQVTADDRPLTSGQRGEVYEMNEDQDRVAVILDINEDSANEGEVENLNDKHRKPAIYWIHVKDIEKDLDAQAQDCYIAVEALCEVLKSRQPLIVYFPDSSQWLHKSVPKSNRKEFFHKVEEMFDKLCGPVVLICGQNRVQSGSKEKDQFTMILPNLGRVAKLPLSLKRLTDGFKGAKSSEDDEIHKLFSNVLCVHPPKDDNLLTTFKKQLDEDRKIVISRSNLNELRNVLEEHQLSCTDLLHVNTDDVILTKQKAEKVVGWAKNHYLSSCLLPSVKGERLCLPRESLEIAISRMKGQETLSRKPSQNLKSLAKDEFESNFISAVVPSDEIGVKFDDIGALEDVKKALNELVILPMRRPELFSRGNLLRPCKGILLFGPPGTGKTLLAKALATEAGANFISITGSTLTSKWFGDAEKLTKALFSFASKLAPVIIFVDEVDSLLGARGGSFEHEATRRMRNEFMAAWDGLRSKENQRILILGATNRPFDLDDAVIRRLPRRIYIDLPDAENRMKILRIVLAQENLVPDFEYDKLAKLTEGYSGSDLKNLCIAAAYRPVQELIEEEEKGGNNGISSVLRALNVDDFVESKAKVGPSVAYDATSMNELRKWNEMYGEGGSRTKSPFGFGS* 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0082 1015 Pfam AAA+ lid domain 915 951 IPR041569 -
Lan7g0082 1015 MobiDBLite consensus disorder prediction 271 318 - -
Lan7g0082 1015 CDD AAA 760 893 - -
Lan7g0082 1015 Pfam ATPase family associated with various cellular activities (AAA) 762 892 IPR003959 GO:0005524|GO:0016887
Lan7g0082 1015 MobiDBLite consensus disorder prediction 90 113 - -
Lan7g0082 1015 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 80 391 - -
Lan7g0082 1015 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 394 1013 - -
Lan7g0082 1015 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 394 1013 - -
Lan7g0082 1015 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 80 391 - -
Lan7g0082 1015 Gene3D - 894 979 - -
Lan7g0082 1015 Gene3D - 721 997 IPR027417 -
Lan7g0082 1015 MobiDBLite consensus disorder prediction 271 304 - -
Lan7g0082 1015 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 720 950 IPR027417 -
Lan7g0082 1015 ProSitePatterns AAA-protein family signature. 865 884 IPR003960 GO:0005524|GO:0016887
Lan7g0082 1015 MobiDBLite consensus disorder prediction 354 376 - -
Lan7g0082 1015 SMART AAA_5 758 895 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0082 Lan-Chr7 411345 423619 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0082 756 957 Calmodulin-binding Proteins AT3G56690 34.783 4.31e-32 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0082 - - gmx:100812718 1583.93