Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0070 ATGGATTGTAGTGCTACGAGAAAGACTCAAAAGGCTGACCGAGAGAAGTTGAGGAGGGATCGGTTAAATGAACAGTTTGCAGAACTGGGCAACATTTTAGACCCTGATCGGCCAAAAAATGACAAAGCAACCATTCTAGGTGATACAATTCAACTGCTGAATGACCTTTCTTCTCAAGTTATCAAACTCAAGGACGAATATACTGCACTAAATGAAGAATCTGATGAGCTGGCACAAGAGAAAAATGATCTCAGAGAAGAGAAGGCTTCTCTTAAGTTGGATATTGAGAACTTGAATAATCAGTATCAGCAGCGACTCAGGAGTGTGTTTCCGTGGACTGCAATGGATCATTCAGTTATGATGGCTCCACCATCATATCCGTATCCAATGCCAGTACCAGTCCGTCCCAGTCCAATTCCCATGCAGACAATCCAGCCGTACCCCTATTTTGTTAATCAAAATCCTGCAGTCATCCCCAACCCTTGTTCAACATATGTTCCTTATTTAGCCCCCAACACTGTTGTTGAACAACAATCCACCCAGTATGTATCGCCACCAGTTTATCCAGGAGGTTGGTCCCACGTGTCAAGCAAACAAGACTCCAAACACAAGTCATCCAGGGAGAGCAGGGCTGAAAGAAGTCAGGCTTCTAATGAAGTTACCACAGACCTTGAGTTGAAGACTCCCGGGTCTTCTGCAGATCAGGATTTAGCTTCTGGACAAAGAAAGTCCAACAAGTCGGCAAGGAAGGAAAACAGTTCCGTAGAAGGGAGTTCTCTAGGTAGGTGTTCTTCGTCTCATAGCATCCAGGATAGCTCATCAAGTAGTGTAGCTGGGAGCAGAAAGGCTAATGAATGA 858 0.4464 MDCSATRKTQKADREKLRRDRLNEQFAELGNILDPDRPKNDKATILGDTIQLLNDLSSQVIKLKDEYTALNEESDELAQEKNDLREEKASLKLDIENLNNQYQQRLRSVFPWTAMDHSVMMAPPSYPYPMPVPVRPSPIPMQTIQPYPYFVNQNPAVIPNPCSTYVPYLAPNTVVEQQSTQYVSPPVYPGGWSHVSSKQDSKHKSSRESRAERSQASNEVTTDLELKTPGSSADQDLASGQRKSNKSARKENSSVEGSSLGRCSSSHSIQDSSSSSVAGSRKANE* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0070 285 PANTHER TRANSCRIPTION FACTOR BHLH121 1 284 IPR044579 GO:0003700|GO:0055072
Lan7g0070 285 Coils Coil 5 25 - -
Lan7g0070 285 MobiDBLite consensus disorder prediction 215 242 - -
Lan7g0070 285 MobiDBLite consensus disorder prediction 251 285 - -
Lan7g0070 285 Coils Coil 53 101 - -
Lan7g0070 285 Gene3D - 4 85 IPR036638 GO:0046983
Lan7g0070 285 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 5 76 IPR036638 GO:0046983
Lan7g0070 285 MobiDBLite consensus disorder prediction 197 214 - -
Lan7g0070 285 CDD bHLH_AtILR3_like 11 85 - -
Lan7g0070 285 Pfam Helix-loop-helix DNA-binding domain 7 56 IPR011598 GO:0046983
Lan7g0070 285 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 6 56 IPR011598 GO:0046983
Lan7g0070 285 MobiDBLite consensus disorder prediction 191 285 - -
Lan7g0070 285 PANTHER TRANSCRIPTION FACTOR BHLH121 1 284 - -
Lan7g0070 285 SMART finulus 12 62 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0070 Lan-Chr7 351678 354156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0070 1 249 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G19860 63.095 1.02e-91 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lan7g0070 HLH 2.9e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0070 - - cam:101491902 407.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0070 7 351678 354156 Lan8g1871 8 24977437 24979181 LSH
Lan7g0070 7 351678 354156 Lan13g0130 13 755845 766352 LSH