Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0061 ATGGCTTTCCTTCTTTGTTTCTTCATCTTCTTTTTTGCTTCATCTGCTACTGCTACTGCTTGTGATACCTGTGTGCATCAAACCAAGGCTACCCACTTCTCCAAAGCCTCTGCTCTTTCATCTGGGGCATGTGGATATGGCTCCCTTGCATTGGGCTTAAGTAATGGACAGCTTGCAGCTGCAGTCCCTTCACTTTTCAAAGATGGAGCTGGTTGTGGTGCCTGTTTTCAGATAAGATGCAAGAATCCCAGTCTATGCACAAAAGCAGGTACCAGAGTGGTAGTGAGTGATCTTAATCACAATAATCAAACAGACTTTGTCTTAAGCAGCAGGGCCTTCACAGCCATGGCTCAGAAGGGTAAGGGCCAACAAATATTGAAGCTTGGCATTGTTGACATTGAATATAAGAGAATACCTTGTGATTACAAAAATCAGAAATTAGCAGTCCGTGTAGAAGAATCAAGCCAAAAACCAAATTACTTAGCAATTCAGTTTTTGTACCAAGGGGGTCAAACAGAGATAGTAGCAGTTGATGTAGCCCGGGTTGGATCTTCAAACTGGAGTTTCTTGAGCAGAAAACATGGTGTAGTGTGGGACACAAACAGGGTTCCAGAAGGTCCATTGCAATTCAGGATGGTGGTAACTGCAGGGTATGATGGAAAATGGATATGGGCACAGAAGGTTTTACCTGCTGATTGGAAAACTGGGGTGGTGTATGACTCTGGTGTTCAGATCACTGATATTGCACAAGAGGGTTGTTCCCCCTGTCATGAACAGAATTGGTCATGA 789 0.4385 MAFLLCFFIFFFASSATATACDTCVHQTKATHFSKASALSSGACGYGSLALGLSNGQLAAAVPSLFKDGAGCGACFQIRCKNPSLCTKAGTRVVVSDLNHNNQTDFVLSSRAFTAMAQKGKGQQILKLGIVDIEYKRIPCDYKNQKLAVRVEESSQKPNYLAIQFLYQGGQTEIVAVDVARVGSSNWSFLSRKHGVVWDTNRVPEGPLQFRMVVTAGYDGKWIWAQKVLPADWKTGVVYDSGVQITDIAQEGCSPCHEQNWS* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0061 262 SUPERFAMILY Barwin-like endoglucanases 10 144 IPR036908 -
Lan7g0061 262 PRINTS Expansin/Lol pI family signature 40 58 IPR007118 GO:0005576
Lan7g0061 262 PRINTS Expansin/Lol pI family signature 62 80 IPR007118 GO:0005576
Lan7g0061 262 PRINTS Expansin/Lol pI family signature 128 144 IPR007118 GO:0005576
Lan7g0061 262 PRINTS Expansin/Lol pI family signature 187 201 IPR007118 GO:0005576
Lan7g0061 262 PRINTS Expansin/Lol pI family signature 227 241 IPR007118 GO:0005576
Lan7g0061 262 SMART dpbb_1 59 135 IPR007112 -
Lan7g0061 262 Gene3D - 11 141 IPR036908 -
Lan7g0061 262 Pfam Lytic transglycolase 60 135 IPR009009 -
Lan7g0061 262 SUPERFAMILY PHL pollen allergen 146 241 IPR036749 -
Lan7g0061 262 Pfam Expansin C-terminal domain 148 230 IPR007117 -
Lan7g0061 262 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 159 241 IPR007117 -
Lan7g0061 262 PANTHER EXPANSIN-B3 6 258 - -
Lan7g0061 262 Gene3D - 142 246 IPR036749 -
Lan7g0061 262 PRINTS Major pollen allergen Lol pI signature 60 71 IPR005795 GO:0005576|GO:0019953
Lan7g0061 262 PRINTS Major pollen allergen Lol pI signature 80 90 IPR005795 GO:0005576|GO:0019953
Lan7g0061 262 PRINTS Major pollen allergen Lol pI signature 117 132 IPR005795 GO:0005576|GO:0019953
Lan7g0061 262 PRINTS Major pollen allergen Lol pI signature 150 165 IPR005795 GO:0005576|GO:0019953
Lan7g0061 262 PRINTS Major pollen allergen Lol pI signature 166 181 IPR005795 GO:0005576|GO:0019953
Lan7g0061 262 PRINTS Major pollen allergen Lol pI signature 217 234 IPR005795 GO:0005576|GO:0019953
Lan7g0061 262 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 41 145 IPR007112 -
Lan7g0061 262 PANTHER EXPANSIN-LIKE A1-RELATED 6 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0061 Lan-Chr7 320894 322871 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0061 18 262 Expansin Gene Family AT4G38400 65.587 7.34e-115 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0061 - - gmx:100819849 422.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0061 7 320894 322871 Lan13g0119 13 705101 706574 LSH