Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0060 ATGGAGTTTGTTGGGAAAAGCGTGAAGAGAGAGTTTGAGGGAATTGGAATTGTGTGTGGTACTGTCAAATCCTATGACTCTTCTTCCGCTTCCGTCGAGATCCAATATGATAATGGTCTTTCTGAGTACTTCAATTCTGCTCAACTCCCTTCCCTTCTTCAACACGACCTTCATTACCACAACCCTCGCAAACCTATAAAACGGCGTCGTTTCCGTCATTCAAGTGAGATTGGAGCAAATTCAGGTAATTTCAGTGATGATTTCGTAGCTGAGGATCTTCAAATTAAGGGGAATTTGGGAGTGTGCGCTGAAATAGGTTCTGACTTTGATACAAGGTTAGGTAATGGAGGGAATCTTGTTGGAAATGTGAACTCGAATGGGGGTGAAGTGATTATAGGAAAGAGTGTTAGGTCTGAGGAGTGTTTGGATCATAAGAGTGTATCTTCTAATGAGAATGGGCTTGATTTGAATGCTAGGATTAATCTGAATGAGGATTTGAATCTGAATGAAGGGTGTACTGGTAGTTTGAAGAGAAGGGATTCATTTGATTTAAATTTGGGTGTGGATGATGAGGAGAATAGTGGCAATTCGGATGTTAATTATTTGGGCTGTTCGGGAGGGCTAACATTGACGGAGGATCGTAACATTGATTTGAATATGGAGGTATGTGAAGAAGTTACGGAAACACAGGGTGATGAAGTCAATGGAAATGAACATTCTCTGGTGTATGCTTTGTTTGATAAGATAGAACAGACTAATATTAATCAGAAATCTATAGAAGGTGATAGTGCTTGTGGTAATCTCAATGATGTCTCCAATGCAAACAAGTTGGAGGTAATTCATGCTTCCACCGAACATGCAGCTAAAGATGCCGCTACACATTTGATTGTGGAAAGTGAAGGTGATGCTGGTAAAGGAGATATATCAACTATTGACTCTCTTAGGGTTACAAGTGCATTTTCTGTTAAGGATAGTAATTATGTGGAGGTTCAGCAAACTGATAATAGTCCTTCTGATTATCTAGGTAGTAGCCGAAGGAAGAGAAGAAAAGTATCAGATAATCTAATAACCACACCACCGACACTTTTAAGGAGGAGTTCTCGCCGGGCATCAGCTAGAAACCAGGTTTCAGGCACCATGGCATTGCAGGAGACGGATGATCCTTTGTCGTCCGGTGTACCCAGTTCCTTAACAGATGAAAAGCCGGTAACCACTAGTGATGAGAAATATGAGCAGTGCAATCTTCCACCACCAAAGTTGCAATTACCCCCTTCTTCTCAGAATTTGGATTTAGATGATCTTCCTGTTCTTGAACTTTTTTCTATTTACACTTTTTTAAGATCTTTCAGTACTATATTATTTTTGAGTCCATTTGAGTTGGAGGATCTTGTTGCTGCACTGAAGTCTGAAACCCCCACTATATTATTTGACAACATCCATGCTTCTATTTTGCAAACTTTGAGAAAGCATTTAGAATACCTTTCCAATGAGGGTTGCCAATCTGCATCCGATTGCCTGAGGAATCTTAACTGGGATTTCTTGGACTTGGTCACATGGCCCATTTTCATGGCCGAGTACCTTCTGATTCATGGCTCAGGATTTAAAACTGCTTATGATCTTAACCACTCAATGTTTAGAACTGACTACTGCAAACAGCCTGTAAATGTGAAGGTTAAGATTCTTCAGTACCTTTGTGATGAAATGATTGAAGTGGAAGCCTTAAGGTCAGAGCTTAACAGAAGATCTTTGGCAACTGAGACTGATGTGGGCTTCAATCAGAATACGTATTTTGACACTTTTAAGAAAAGAAGAGTTGTAATGGATATGTCTAGTGCCTCTTGCTCGACTGAGGAGATTGTGGATGACACCACTGACTGGAACAGTGACGAGTGCTGCCTCTGTAAGATGGATGGGAGCTTAATATGCTGTGATGGCTGCCCTGCTGCGTTCCACTCAAGGTGTGTGGGAATCGCAAGTGACAGTCTGCCCGAAGGTGACTGGTATTGCCCTGAGTGTGCAATTGGGCCACACGGGGCTTGGATGAAATCGCGAAGGTCACTTCGAGGAGCAGACTTGTTAGGGATTGATCTTCATGCCCGTCTTTATTTTAACAGCTGTGGTTACCTATTAGTGTCAGACTCATCTGACACAGGCTCCTTGTTCAACTACTACCACAAAAATGATATACATGTAGTAATTGAAGTTCTAAAGTCTATGGGTACTTTGTATGGAAGCATATTAATGGCTATTTATGAGCATTGGGATATCCCTGCCAACTTAAGTGCGGGGACTAGTAACTTGGTAGTCTTTAAGCAAAGTTCCTGCAAAAACGTCCATATGAGTGGAAATTTGAACAAAAATCGGTCTGATGATGAAAGAAATTTTGATGAAAATCCAACTGTTGACTGTTCTACTTATCCTGGCCAAGAATTTCCAAAAGCTGGGACCCACTTAGATTCAATGACAACTATAGAAAGTCCTTTTGTTGCTTCAGAAGGGTTAGCTGATACCACAAAAATAAGGTCAGGGATTGAGAATGTTGAAATATCTGGGATTTGTGACTCCAATGGATCTGGTGTATCCTTGAATCAGTTTGGAATACCAGAAAAACACCATCCAGTTGGTGATTGTTCTTTGACATCTGCCAGCTTAGATGTGGGACATAACATAAACTTAAGATCTGTGGGTGTCAGCTGTAACCCCTCCACTGACAATAAGGATACCTCAGTAGTGCCTTGTGGAATTGACTTCATAAACTACTACAGCTTTGCCCGAACAGCCACATTAGTTTCAGAAGAGTTGATATGCAAGTCACCTGAAAAGATCAATGTAATGTCTGAAGAGGACATAATTTCGGACCAAGCAAAGGCCATTATGAAGAAATCTTCAAATTTTTGTTGGCCAAGTATTGAAAACCTGAATGGAGCTGCTGAAAAGGAAAAATGTGGGTGGTGCTTTTCTTGCAAAGTTGCTAATGATGACCGGGATTGCTTGTTTAATGATGTGATGAAGTCTGTTCTTGATGTGCCTAATAATACTTTAGTCGGACTTCAATCCAGGAAGATCCATAATGGACATCTTAGGGCAATCATATGTCATATTGTTTCCCTTGAGGACCGGTTACGTGGGCTTTTGTTGGGTCCATGGTTGGATCCACATCAAACCAATCTTTGGCATCAGGAACTTATGAAGACATCTGATTTTCTTCCTGTTAAACGATTATTGCTCCTTTTAGAATCCAATCTGCGGCATTTTGCACTCTCGGCAGATTGGTTGAAGCATGCAGATTCTGTTACTACTATGGGATCATCTACTCATATTGTGGTCAGTTCATCACGCACGTCTTCAAGGCATGGTATTGCAAGGAAAAGGGCCAGATATTCAGATGTTGAGTCCAATTCATCTTCTAAGGCTGCTAGTGGTTTGGGAATATATTGGTGGAGAGGTGGGAGGCTTTCCCAACAATTGTTTAATTGGAAGTCTTTGCCTCGCTCCTTGGTTACCAAGGCTGCTAGACAAGCTGGGTGTAAAAAGATACCAGGTATTTTATATCCTGAGAATTCAGACTTTGCAAGGAGAAGCAAATATGTAGCCTGGCGAGCTGCTGTTGAGATGTCAACAAGTGTTGCACATCTTGCTTTACAGGATGCCAATATTCATCAAGCTCATCAAACAAATTATTCCGAAGAACACATATCTGAGAATGTGAATGTTAACATTTATGGACCACTGTTTCCAAACCTGAGCTGTGAAGAATACATATCTGAGAAGATTAGAGAGCTTCATTCAAACATAAAGTGGCATGATATTGAGAATAGCCATCCTCAGTATGTGTTGGACAAGGAATCTAGAAAGTCAACCAGGCTGTTCAAAAAAGTAATTGTACGGAGGAAGTGCATTGAAGGGGAATCTGTGAAATACCTTCTTGATTTTGGGGGGAAGAGAAGGGCCATTCCAGATATTGTTGTCAAACATGGTTCTTTGTTGGAAGAACCCTCAAGTGAGAGGAAAAAATATTGGCTGGACGAATCTTATCTTCCCTTGCATCTCTTGAAGAATTTTGAGGAAAAAAGAATTGTCCGCAAGTGCACTGAAAAGAAACATGGTAAAGTTATTGAGATTGGTAGAGTAAAGAAGAGGATACCTCGGGAAATGGTTTTCTCATATTTGTTCTCTAAAATGGAAAGATCTGATTGTCAACAGTGTGGCCACTGCAACAAAGACGTTCCAATCAGGGAAGCTGTGAGCTGCCTTCATTGCAAAGGATATTTCCATAAGAGGCATGTCAGGAGATCCCATGGTACGAGCACGACTGGATATACATATTCATGCCACAGATGCCAAGATGGGATGCGTGTAAAGGCTAATAATACCAGCAGAAGGAGAGTTGACTCAAAACTGCAGAAGATTCAATCACAGAAATGTAAAAATCTTCCCTCACTTTGTAAATCAGTGAACCTTAAGGGCAATAAAAAGGCATTGAGTAAGGCGCAGCAGTTAAGATCTCAAACCAATAAGAAGATCCCACCAAGTGTACCTCTTCGCCGTTCTGCTAGGAAGGTCAAATCCTTGTATCTGCACCGTCAAATGAATAGAGGTCATAAAAAAGGAATACAAAGTAAAAAGAATGTAGGACGTAAAAAAGGGACGCAAAGTAAATCCAAGAAGCTGACTTCTCAGAAGCCCAAGGCAACTACAGCTCAGTGTAAGACGTTGGCAGTAACTACTCTTTGTAAGAAAAGAACGAATATCTATAGTAGTTACTGGCTTAATGGTATCAGGTTCTCTACAAAGCCAAATGATGAACGAGTAATGTTGTTTAGGGAGAAAAAGCATGTTATCTCTTCTGAAGATTTTTCAGGCAGCCTTGATCATTGTAAATGCAGCCTTTGTTGTCTAGATGGATGCACTTCAAATTATATTGCTTGTGAAACTTGTGGAGATTGGTTTCATGGGGATGCTTTTGGGCTTACCCTTGACAATGCCAGACAACTTATTGGATTTAGGTGCCATGTTTGTCGTGATAGGGCTGCTCCAGTCTGCCCCCATATGAAGATTAATGCATTGCCTCGCACTGAAAGCAACATGGCAACTGAGTGTGCAGAGGAATTGTCTAATCCTGTTTCCCTCCAGCCATTGAGTGTGGTTTGA 5151 0.4102 MEFVGKSVKREFEGIGIVCGTVKSYDSSSASVEIQYDNGLSEYFNSAQLPSLLQHDLHYHNPRKPIKRRRFRHSSEIGANSGNFSDDFVAEDLQIKGNLGVCAEIGSDFDTRLGNGGNLVGNVNSNGGEVIIGKSVRSEECLDHKSVSSNENGLDLNARINLNEDLNLNEGCTGSLKRRDSFDLNLGVDDEENSGNSDVNYLGCSGGLTLTEDRNIDLNMEVCEEVTETQGDEVNGNEHSLVYALFDKIEQTNINQKSIEGDSACGNLNDVSNANKLEVIHASTEHAAKDAATHLIVESEGDAGKGDISTIDSLRVTSAFSVKDSNYVEVQQTDNSPSDYLGSSRRKRRKVSDNLITTPPTLLRRSSRRASARNQVSGTMALQETDDPLSSGVPSSLTDEKPVTTSDEKYEQCNLPPPKLQLPPSSQNLDLDDLPVLELFSIYTFLRSFSTILFLSPFELEDLVAALKSETPTILFDNIHASILQTLRKHLEYLSNEGCQSASDCLRNLNWDFLDLVTWPIFMAEYLLIHGSGFKTAYDLNHSMFRTDYCKQPVNVKVKILQYLCDEMIEVEALRSELNRRSLATETDVGFNQNTYFDTFKKRRVVMDMSSASCSTEEIVDDTTDWNSDECCLCKMDGSLICCDGCPAAFHSRCVGIASDSLPEGDWYCPECAIGPHGAWMKSRRSLRGADLLGIDLHARLYFNSCGYLLVSDSSDTGSLFNYYHKNDIHVVIEVLKSMGTLYGSILMAIYEHWDIPANLSAGTSNLVVFKQSSCKNVHMSGNLNKNRSDDERNFDENPTVDCSTYPGQEFPKAGTHLDSMTTIESPFVASEGLADTTKIRSGIENVEISGICDSNGSGVSLNQFGIPEKHHPVGDCSLTSASLDVGHNINLRSVGVSCNPSTDNKDTSVVPCGIDFINYYSFARTATLVSEELICKSPEKINVMSEEDIISDQAKAIMKKSSNFCWPSIENLNGAAEKEKCGWCFSCKVANDDRDCLFNDVMKSVLDVPNNTLVGLQSRKIHNGHLRAIICHIVSLEDRLRGLLLGPWLDPHQTNLWHQELMKTSDFLPVKRLLLLLESNLRHFALSADWLKHADSVTTMGSSTHIVVSSSRTSSRHGIARKRARYSDVESNSSSKAASGLGIYWWRGGRLSQQLFNWKSLPRSLVTKAARQAGCKKIPGILYPENSDFARRSKYVAWRAAVEMSTSVAHLALQDANIHQAHQTNYSEEHISENVNVNIYGPLFPNLSCEEYISEKIRELHSNIKWHDIENSHPQYVLDKESRKSTRLFKKVIVRRKCIEGESVKYLLDFGGKRRAIPDIVVKHGSLLEEPSSERKKYWLDESYLPLHLLKNFEEKRIVRKCTEKKHGKVIEIGRVKKRIPREMVFSYLFSKMERSDCQQCGHCNKDVPIREAVSCLHCKGYFHKRHVRRSHGTSTTGYTYSCHRCQDGMRVKANNTSRRRVDSKLQKIQSQKCKNLPSLCKSVNLKGNKKALSKAQQLRSQTNKKIPPSVPLRRSARKVKSLYLHRQMNRGHKKGIQSKKNVGRKKGTQSKSKKLTSQKPKATTAQCKTLAVTTLCKKRTNIYSSYWLNGIRFSTKPNDERVMLFREKKHVISSEDFSGSLDHCKCSLCCLDGCTSNYIACETCGDWFHGDAFGLTLDNARQLIGFRCHVCRDRAAPVCPHMKINALPRTESNMATECAEELSNPVSLQPLSVV* 1717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0060 1716 Pfam PHD-finger 631 673 IPR019787 -
Lan7g0060 1716 ProSiteProfiles DDT domain profile. 433 493 IPR018501 -
Lan7g0060 1716 SMART PHD_3 630 673 IPR001965 -
Lan7g0060 1716 SMART PHD_3 1627 1674 IPR001965 -
Lan7g0060 1716 SMART PHD_3 1401 1448 IPR001965 -
Lan7g0060 1716 CDD PHD1_AIRE 630 672 - -
Lan7g0060 1716 ProSitePatterns Zinc finger PHD-type signature. 631 672 IPR019786 -
Lan7g0060 1716 MobiDBLite consensus disorder prediction 1520 1554 - -
Lan7g0060 1716 MobiDBLite consensus disorder prediction 331 424 - -
Lan7g0060 1716 SMART testlast3 433 493 IPR018501 -
Lan7g0060 1716 Pfam DDT domain 437 489 IPR018501 -
Lan7g0060 1716 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1620 1680 IPR013083 -
Lan7g0060 1716 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 617 688 IPR013083 -
Lan7g0060 1716 ProSiteProfiles Zinc finger PHD-type profile. 628 675 IPR019787 -
Lan7g0060 1716 PANTHER PHD-FINGER AND DNA BINDING DOMAIN-CONTAINING PROTEIN 1 1219 - -
Lan7g0060 1716 PANTHER PHD-FINGER AND DNA BINDING DOMAIN-CONTAINING PROTEIN 1254 1691 - -
Lan7g0060 1716 PANTHER PHD FINGER FAMILY PROTEIN 1 1219 - -
Lan7g0060 1716 PANTHER PHD FINGER FAMILY PROTEIN 1254 1691 - -
Lan7g0060 1716 SUPERFAMILY FYVE/PHD zinc finger 1624 1677 IPR011011 -
Lan7g0060 1716 SUPERFAMILY FYVE/PHD zinc finger 613 673 IPR011011 -
Lan7g0060 1716 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 546 579 IPR028942 -
Lan7g0060 1716 MobiDBLite consensus disorder prediction 354 401 - -
Lan7g0060 1716 MobiDBLite consensus disorder prediction 1497 1562 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0060 Lan-Chr7 305212 318854 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0060 1 1690 PHD Transcription Factor Family AT5G12400 38.809 0.0 1048
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Lan7g0060 DDT 1.1e-11 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0060 7 305212 318854 Lan8g1881 8 25062531 25078010 LSH