Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0048 ATGAAAGGAATTAATGGCTGCCACCAACCGTATTTTGTGTGCAGCCATGAAGATGTTGTAACTGTAGATGTGTATGCTGCCAAAGATCTGCTCAATTCAGCTGCTTACACTTATCTTGATGTCAGGTCAGTTGAGGAATTCAACAAAAGCCATGCTGATAATGCTCATAATGTCCCCTACATGTTCATCACAGAAGCGGGAAGGGTGAAAAACCCAGATTTTGTTGGGCAGGTATCAGCATTATTCAACAGTGAGGATAACTTAGTTGTGGCTTGTAATAGTGGAGGAAGATCACTCAAAGCCAGTGTTGATCTCATTGATTCAGGATTTAAGCATATTGTTAATGTGGGAGGAGGTTACTCGGCTTGGGTAGATGCTGGATTTGCAGGGAACAAACCAGCAGAAGAACTCAAAACTGCTTGCAAGTTCCGTCCTTAA 438 0.4247 MKGINGCHQPYFVCSHEDVVTVDVYAAKDLLNSAAYTYLDVRSVEEFNKSHADNAHNVPYMFITEAGRVKNPDFVGQVSALFNSEDNLVVACNSGGRSLKASVDLIDSGFKHIVNVGGGYSAWVDAGFAGNKPAEELKTACKFRP* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0048 145 CDD RHOD 27 124 - -
Lan7g0048 145 Gene3D - 9 129 IPR036873 -
Lan7g0048 145 ProSiteProfiles Rhodanese domain profile. 32 132 IPR001763 -
Lan7g0048 145 PANTHER THIOSULFATE SULFURTRANSFERASE 18 14 143 IPR044684 GO:0003824
Lan7g0048 145 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 18 128 IPR036873 -
Lan7g0048 145 SMART rhod_4 22 129 IPR001763 -
Lan7g0048 145 PANTHER PROTEIN HIGH ARSENIC CONTENT 1, MITOCHONDRIAL-RELATED 14 143 - -
Lan7g0048 145 Pfam Rhodanese-like domain 27 125 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0048 Lan-Chr7 232916 233986 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0048 17 136 Sulfurtransferasese or Rhodanese AT5G66170 51.639 4.51e-39 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0048 K22547 - gmx:100794624 228.024