Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0011 ATGGCAAGCATGCAGGGAAAGATATTCTTAACACTTTTATTACTATCCTCCTCACTTTTCTCATTAGCCACATCAAGAAGATCAAGATCATCCAGCAACATAGATTGGTGGTGCAACCAAACTCCACACCCCGAGCCATGCAAATACTATCTTAGGCAAAAGCAACAACACCGTTACATACTCAAACACAAAGCCAAGTTCAGAGAAGTTCTAGTTCACTTGGCCTTAGGGAGATCACTCATCATGCAAACACAAGCACGCCAATTCAGACTAAACTCAATCACAATGAAGCACAAATCTGTCTTAGATGTTTGTTTGAAACTCTATGATAACACCGTTTTCCATCTCAATCGTACCCTTGTAGGCCTTAAAGTCAGAAAAAGTTGTTCATCTTTTGATGCACAAACATGGCTTAGCACTGCTCTAACAAACATTGAAACATGTAGAAGTGAGGCCTTGGAATTTAGTGTTCCAGATTTCATAGTTCCCGCACCGAGTAGCAATGTGACTGAGATAATAAGCAATAGCTTAGCAGTGAATTATGGTTTCACGAAAGAAGAAGCAAGTCATTACACACAAGATAATGAAGTAGATGGGTTTCCAAAATGGATTACGAGGCATGAGAGGAAGCTGTTGAAGTCTTCATCAATAAAGCCAAATCTTGTGGTAGCTAAAGATGGTTCTGGACAATTCAAGACAGTGCAAGGTGCTATAAATGCAGCAGCAAGGAGAAGAAACAAGAGTAGGTTTGTTATAAAAGTGAAGAGAGGAGTATATAGAGAGAATATTGAGGTTGATAAGTCAAATGATAACATAATGCTGGTTGGTGATGGAATGAGATATACAATTATCACAAGTGCCAGAAGCGTTCAAAATGGCTTCACCACCTATAGCTCTGCAACTGCAGGAATTGATGGGCTTCACTTTATTGCACGTGACATTACCTTCAAGAACACTGCTGGTCCTACGAAGGGTCAAGCAGTGGCACTGAGATCAGCCTCTGACCTCTCCGTATTCTACCACTGTTCAATTGAAGGTTACCAAGACACACTAATGGTTCATGCACAGCGTCAATTCTATAAAGGTTGTTACATATATGGCACCGTTGACTTCATTTTTGGGAATGCTGCAGTAGTTTTTCAAAACTGTGTTATTCTTGTAAGAAGACCTTTAAATGGACAAGCAAATATGATAACTGCCCAAGGTAGAGGTGACCCATTTCAAAACACAGGAATCTCAATACACAACTCTCAAATAAGGGCTGCACCTGATCTTAAACCTGTTGTTAATAAATTCAAGACATTCTTGGGTAGGCCATGGCAAGAATATTCAAGAGTAGTTGTGATGAAGAGTTATATAGACACATTGGTGGATCCAATGGGTTGGTCACCATGGGGAGATAGTAATTTTGCTGAGAAGACATTGTACTTTGGAGAATACAATAACATAGGAGGAGGATCATCAACAAGGAAAAGGGTAAAATGGTCAGGTTATCATGTTATAAGAACATCAAAAGAGGCATCAACTTACACTGTTGCTACTCTCCTTGCTGGACAAACATGGTTGCCTTCAACTGGCATTCCATTTACTCTTGGCCTTTAA 1602 0.3989 MASMQGKIFLTLLLLSSSLFSLATSRRSRSSSNIDWWCNQTPHPEPCKYYLRQKQQHRYILKHKAKFREVLVHLALGRSLIMQTQARQFRLNSITMKHKSVLDVCLKLYDNTVFHLNRTLVGLKVRKSCSSFDAQTWLSTALTNIETCRSEALEFSVPDFIVPAPSSNVTEIISNSLAVNYGFTKEEASHYTQDNEVDGFPKWITRHERKLLKSSSIKPNLVVAKDGSGQFKTVQGAINAAARRRNKSRFVIKVKRGVYRENIEVDKSNDNIMLVGDGMRYTIITSARSVQNGFTTYSSATAGIDGLHFIARDITFKNTAGPTKGQAVALRSASDLSVFYHCSIEGYQDTLMVHAQRQFYKGCYIYGTVDFIFGNAAVVFQNCVILVRRPLNGQANMITAQGRGDPFQNTGISIHNSQIRAAPDLKPVVNKFKTFLGRPWQEYSRVVVMKSYIDTLVDPMGWSPWGDSNFAEKTLYFGEYNNIGGGSSTRKRVKWSGYHVIRTSKEASTYTVATLLAGQTWLPSTGIPFTLGL* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0011 533 Pfam Pectinesterase 220 518 IPR000070 GO:0030599|GO:0042545
Lan7g0011 533 Gene3D - 213 533 IPR012334 -
Lan7g0011 533 Gene3D Invertase/pectin methylesterase inhibitor family protein 28 182 IPR035513 -
Lan7g0011 533 PANTHER PECTINESTERASE 4 532 - -
Lan7g0011 533 TIGRFAM PME_inhib: pectinesterase inhibitor domain 9 181 IPR006501 GO:0004857
Lan7g0011 533 CDD PMEI-like_3 36 185 - -
Lan7g0011 533 Pfam Plant invertase/pectin methylesterase inhibitor 33 178 IPR006501 GO:0004857
Lan7g0011 533 PANTHER PECTINESTERASE 4 532 - -
Lan7g0011 533 SUPERFAMILY Pectin lyase-like 217 532 IPR011050 -
Lan7g0011 533 ProSitePatterns Pectinesterase signature 2. 365 374 IPR033131 -
Lan7g0011 533 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 180 IPR035513 -
Lan7g0011 533 SMART PMEI_2 29 179 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0011 Lan-Chr7 49415 51648 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0011 31 533 Carbohydrate Esterase AT3G47400 57.476 0.0 609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0011 K01051 - gmx:100807908 780.015