Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g2282 ATGATGCACTTCCACAACCTTCTTATCCTTGCAAGGTTGTGGATTGCTTTGCTCGTGATCTCAACCTTATTCACTCTTCTAGTTCATGCCAAAACTGCCTCCCAAGATGTTTCATCCCTTAATGTGATGTTTACGAGCTTGAATTCACCGTCGAAATTGAGTGGATGGAAATCAAGTGGAGGCGATCCTTGTGGTGACTCATGGGAAGGGATCACATGTGATGGCTCATCTGTCACAGAAATTAATTTATCTAACATGGGACTTTCTGGTTCAATGGGCTACCAGCTTTCAACCTTAACATCAGTTACCCTCTTTGATTTGAGCAACAACAACTTCAAGGGTGATATACCGTATCAACTTCCCCCGAATGTTCGTCATATGGATCTTTCTAATAATGGCTTCACTGGAAGTATACCTTATTCCATCTCTCAAATGAAAGACCTCAACTACCTAAGTCTCGCGCATAATAAGCTCAATAACCAGCTCGGTGATATGTTTGCCAAACTCAATAAACTCAAAGAATTGGATGTATCAGACAATTCACTATCAGGAGACCTGCCCCAGAGTCTTAAATCGCTTTCAAGCCTCAAGAAGTTACATTTGCAAAACAATCAATTCTCTGGTTCAATAAATGTGCTTACCAAACTTCCACTTCAAGAATTGAATGTCGAGAACAACAAATTTACTGGTTGGGTCCCTGAGGAGTTAAAAGAAATAGATAGTTTGCAAACTGGAGGAAACTCTTGGTCAAAAGGGCCAGCACCACCACCTCCTAAGGGTACACCACCTTTCAAGCATTCCGAGAAAGAGAAGAGTACTAATAAGTCAGTTGCTAGTGGAATAGCTATAGCAGGCATAGCTATTGCTGTATTGATAGTGATTATAATTATTGCTGCTTTAATTAAAAAAAGGTCACCGTCACCTTCTTCAAATTTCATTGATGAAGAGACGCATAGCCACCGGCATAGATCATTTACACCACTTGCATCTCAAGAGTTAACCAAAAATGATTCTGGTTCTGATGCTGTCAACAAAGAATACAAAGGATTTAAGTCATCATTGGACTCAACTACAATTGACATGAAAGCATTGCAAAAAAATCCATCTATTGGTGTGAGGTCATCAGTCTCAGATTGTGTGCAGTCCTTTAATGATAATGAGTTTGCAAAACGTCTAAACTCTAAAAGAAGTACCTCAGTCCGATGTACTCCTTTTTCATTGGCAGAGTTACAGACTGCAACTGCTAATTTTGCTTCAGGTCGACTTCTTGGTGAGGGATCCATCGGATGTGTTTATCGTGCCAAATATGTTGATGGAAAGGTATTGGCTGTGAAAAAAATCAAACCTTCACTTTTGGATGGTGGGCATCCTGAAGAATTCTCTCAAATAGTATCAAATATGGGAAAACTTCACCATCCAAATATTTCTGAGCTAGTGGGTTATTGTTCAGAACAGCAGGAGCACATGTTAATATATGATTATTTCAGGAATGGTTCTCTGCATGATTTCTTACACTTATCAGATGACTTCAGCAAACCACTCACTTGGAACACCAGAGTCAGAATTGCACTCGGAACAGCTCGGGCTGTTGAGTACCTACATGAAACATGTTCCCCATCAGTAACTCACAAGAATATAAAGTCCCCGAATATATTGTTAGACATGGATCTGAATCCTTGTCTCTCAGATTATGGTTTGTCATCATTCCACCATCGAACAAGTCAAAATCTAGGGGCAGGATATAATGCACCAGAATGTACAAAACCATCAGCATATACACTAAAGAGTGATGTATACAGTTTTGGAGTAGTGATGTTGGAACTATTGACAGGTAGAATGCCTTTAGACAGTTCAAAGCCAAAAGCAGAACAATGTCTAGTTCGTTGGGCAACACCACAGCTTCATGACATTAATGCAGTTGAGAAAATGGTGGACCCTGCCCTTAGGGGACTTTACCCTCCTAAGTCACTCTTTCGATTTGCAGATATCATTGCACTCTGTGTACAGTCTGAACCGGAATTTCGGCCACCGGTGTCAGAGGTGGTTCAGGCATTGGTGCGATTAGTTCAGCGTTCAAGTATGAAAATGAGAGATGATCTTACCACTTATGATGACTGA 2118 0.4046 MMHFHNLLILARLWIALLVISTLFTLLVHAKTASQDVSSLNVMFTSLNSPSKLSGWKSSGGDPCGDSWEGITCDGSSVTEINLSNMGLSGSMGYQLSTLTSVTLFDLSNNNFKGDIPYQLPPNVRHMDLSNNGFTGSIPYSISQMKDLNYLSLAHNKLNNQLGDMFAKLNKLKELDVSDNSLSGDLPQSLKSLSSLKKLHLQNNQFSGSINVLTKLPLQELNVENNKFTGWVPEELKEIDSLQTGGNSWSKGPAPPPPKGTPPFKHSEKEKSTNKSVASGIAIAGIAIAVLIVIIIIAALIKKRSPSPSSNFIDEETHSHRHRSFTPLASQELTKNDSGSDAVNKEYKGFKSSLDSTTIDMKALQKNPSIGVRSSVSDCVQSFNDNEFAKRLNSKRSTSVRCTPFSLAELQTATANFASGRLLGEGSIGCVYRAKYVDGKVLAVKKIKPSLLDGGHPEEFSQIVSNMGKLHHPNISELVGYCSEQQEHMLIYDYFRNGSLHDFLHLSDDFSKPLTWNTRVRIALGTARAVEYLHETCSPSVTHKNIKSPNILLDMDLNPCLSDYGLSSFHHRTSQNLGAGYNAPECTKPSAYTLKSDVYSFGVVMLELLTGRMPLDSSKPKAEQCLVRWATPQLHDINAVEKMVDPALRGLYPPKSLFRFADIIALCVQSEPEFRPPVSEVVQALVRLVQRSSMKMRDDLTTYDD* 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g2282 705 Gene3D Ribonuclease Inhibitor 33 264 IPR032675 -
Lan6g2282 705 Gene3D Phosphorylase Kinase; domain 1 376 494 - -
Lan6g2282 705 SUPERFAMILY L domain-like 44 243 - -
Lan6g2282 705 ProSiteProfiles Protein kinase domain profile. 417 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g2282 705 PANTHER OS01G0253100 PROTEIN 24 702 IPR045271 GO:0004714|GO:0006468
Lan6g2282 705 Pfam Leucine rich repeat 122 182 IPR001611 GO:0005515
Lan6g2282 705 Pfam Leucine rich repeat N-terminal domain 34 74 IPR013210 -
Lan6g2282 705 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 5 24 702 - -
Lan6g2282 705 Gene3D Transferase(Phosphotransferase) domain 1 495 704 - -
Lan6g2282 705 MobiDBLite consensus disorder prediction 243 272 - -
Lan6g2282 705 SUPERFAMILY Protein kinase-like (PK-like) 396 685 IPR011009 -
Lan6g2282 705 Coils Coil 155 175 - -
Lan6g2282 705 Pfam Protein tyrosine and serine/threonine kinase 420 685 IPR001245 GO:0004672|GO:0006468
Lan6g2282 705 ProSiteProfiles Leucine-rich repeat profile. 195 217 IPR001611 GO:0005515
Lan6g2282 705 MobiDBLite consensus disorder prediction 305 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g2282 Lan-Chr6 32937541 32941471 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g2282 10 702 Strubbelig Receptor Gene Family AT1G78980 61.836 0.0 846
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Lan6g2282 PK_Tyr_Ser-Thr 6.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g2282 - - mtr:MTR_4g005130 1032.71