Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g2277 ATGGATGAAATTGGAAGGGATGGTGGCGGCGGTGGTGGTGGTTTCCCTGTTGGCGGCGGTGGTTGTCGTGGATCACACTTACGCAGCAACACTTACGACTCTCTTCTTCATATCCTCTCTCACCTTTCTCCCTTTCTCTCTCAAAATCCTCAAGATGATTCGAGTCTTAGTAGAGTGGAGGAGCAACAAAATGAGCCTTCTTCTGATTTTAGGGATCCCAATGAGGATCACAACAAAGACACCATTGCAACAGACCAAGTTACAGAACAAACGCTTTTGAATGAGATGGACCTCCTTCTCCAACAACAACAACAACAACAACAACAACAACAATGCCCTCAATTTGGAATTAATGAAATGCCCAACACAATTGAAGAAGAAGAAGAAGGAGAATTTTTTGGAGACTTTGTCATCGATGACAATTTATTTGATTTCTCTTCTGATAACCCTTTAGTATTGGAACACCACAACATAGACAACCAGGACATTCACAAACCCAAAACTGCTGTTAAGGATATCACACTTCCCTCTGATTTACAAAATGCTGAGAAGGAACAAGGTTTTCAACCTAATTCCTTTATAGCAAACAAAGTTCAACATGACACTGATAACAATGGGATTGCAAGTGGAGTTCATAAGGCAGATGACTTGCCAATAAATTCTACTCACAATCTAGTCTTTTACGGAGATTTATGGGAAGCCGACGATTCTCAATATATGCAGAAAGATGATGTCAGCAGTAAGACAAAGCGTGGTCCTGGTAATAATGCGGAAAAGAAAGCAAGAAAGAAGCGAAAACAACGACAGAAGCGGGCAGAAATGAACAGAGAACATGGTGTTAAGAGGTTGAAGTTGCCTCCACCTCCAGTACAGAAATCTAAAGCTAAAACTATCACATGTCGCCATTATTGCTATGGAAGGTGCTATGAGGGTGACAAGTGCAAGTTTGCACATGATGTAGAGCCTTTGACAAAATCCAAGCCATGCCGTCATTTTGCTCGTAACTCTTGCATGAAAGGAGATGACTGCCCATTTGATCATCAGCTCTCCAAGTATCCCTGTGAAAAATTTGCGTCCGGAGGTTGTGGCAGAGGTGATGCTTGTTTGTTTTCCCACCAGGTACCAACCGAACAATGTATTCCTACCCTTTCAAACGTTTCCAAACCAGAGATGAAGTCTCCGTCCCCGTTGGGAAATACAAATTTGAGTATGGCAGTTAATAATCGTGGCTGTAATCCTGTTCAGGAAAACCACTTCTCCAATTCTACAGGAATTCATTCTCCCATGACTGCAGAACATAAGGTGACAAGCTCTTTACAGAAACATCCCATGCCAACACCCAAAGGAATTAGTTTCCTCAATGTTGCAAAACCATCATTGCTCAGCCCTAGCACGCCGAAAGAAGGCATGGTAACTGCAAACAAGGATAGTCGTGTCCAGATTAGGACTAATGCTGACCAAAGTGCATCTGGGACAAATAAAATCTCTGTGGAAATTCCTAAGAAGTCGTCAGCTGTGACTCCTAAGGGAATTAACTTTCTTTCTTTTGCCAATGGCAGTTTGAAGAGTTCTGTTAGCTCCCTTTTAAACATGGAAAGTGGTAACAGGTTGCCTCAGTCAGTCAATTTTGGTTTCAATAGGGATGATTACAGCAAAGTTTACTCACATGGGGATAACAGCCATAGTAAATCAGTTCAAGACAGAAAAAAGGCGTCTGAAAATTCTCAGACTTCAACTGTAACCTCATCTATGACTCTTGCTTCTCCATTTGTTTCAAATCAATCTTCAGCATCAAACTCAGGCAAAAGGGCAATCTTATCAACTTTAGCATTTGCAGCAGATTATGAATCAGATATTAAGATGAAATCCCTCAGAAGAGAACAAGGAAAACAACAATAG 1899 0.4144 MDEIGRDGGGGGGGFPVGGGGCRGSHLRSNTYDSLLHILSHLSPFLSQNPQDDSSLSRVEEQQNEPSSDFRDPNEDHNKDTIATDQVTEQTLLNEMDLLLQQQQQQQQQQQCPQFGINEMPNTIEEEEEGEFFGDFVIDDNLFDFSSDNPLVLEHHNIDNQDIHKPKTAVKDITLPSDLQNAEKEQGFQPNSFIANKVQHDTDNNGIASGVHKADDLPINSTHNLVFYGDLWEADDSQYMQKDDVSSKTKRGPGNNAEKKARKKRKQRQKRAEMNREHGVKRLKLPPPPVQKSKAKTITCRHYCYGRCYEGDKCKFAHDVEPLTKSKPCRHFARNSCMKGDDCPFDHQLSKYPCEKFASGGCGRGDACLFSHQVPTEQCIPTLSNVSKPEMKSPSPLGNTNLSMAVNNRGCNPVQENHFSNSTGIHSPMTAEHKVTSSLQKHPMPTPKGISFLNVAKPSLLSPSTPKEGMVTANKDSRVQIRTNADQSASGTNKISVEIPKKSSAVTPKGINFLSFANGSLKSSVSSLLNMESGNRLPQSVNFGFNRDDYSKVYSHGDNSHSKSVQDRKKASENSQTSTVTSSMTLASPFVSNQSSASNSGKRAILSTLAFAADYESDIKMKSLRREQGKQQ* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g2277 632 MobiDBLite consensus disorder prediction 64 80 - -
Lan6g2277 632 SUPERFAMILY CCCH zinc finger 295 319 IPR036855 GO:0046872
Lan6g2277 632 SMART c3hfinal6 351 374 IPR000571 GO:0046872
Lan6g2277 632 SMART c3hfinal6 294 320 IPR000571 GO:0046872
Lan6g2277 632 SMART c3hfinal6 323 349 IPR000571 GO:0046872
Lan6g2277 632 MobiDBLite consensus disorder prediction 239 256 - -
Lan6g2277 632 MobiDBLite consensus disorder prediction 46 63 - -
Lan6g2277 632 ProSiteProfiles Zinc finger C3H1-type profile. 323 350 IPR000571 GO:0046872
Lan6g2277 632 MobiDBLite consensus disorder prediction 554 601 - -
Lan6g2277 632 MobiDBLite consensus disorder prediction 571 601 - -
Lan6g2277 632 MobiDBLite consensus disorder prediction 239 292 - -
Lan6g2277 632 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Lan6g2277 632 PANTHER PROTEIN SUPPRESSOR OF SABLE 54 607 - -
Lan6g2277 632 Gene3D - 289 352 - -
Lan6g2277 632 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEI 54 607 IPR045124 GO:0003723|GO:0045892
Lan6g2277 632 Coils Coil 257 277 - -
Lan6g2277 632 ProSiteProfiles Zinc finger C3H1-type profile. 353 375 IPR000571 GO:0046872
Lan6g2277 632 MobiDBLite consensus disorder prediction 554 570 - -
Lan6g2277 632 MobiDBLite consensus disorder prediction 46 80 - -
Lan6g2277 632 ProSiteProfiles Zinc finger C3H1-type profile. 294 321 IPR000571 GO:0046872
Lan6g2277 632 MobiDBLite consensus disorder prediction 257 271 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Lan6g2277 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g2277 - - lang:109351398 1209.51