Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g2276 ATGAAGGATAAGGAGAAGGAGAAAGAGAAAGAGACATCGGAGAAGAAGAAATACCCGATCGGAGCAGAGCATTACGTCATCTATGAAGAGATTGGACAAGGTGTGAGTGCTTCCGTCCACCGCGCTCTCTGTATCCCTTTCCATGAAGTCATCGCCATCAAAATCCTCGACTTCGAACGTGACAATTGCGATCTCAATAATGTATCTCGTGAAGCTCAGACAATGATCCTAGTGGATCACCCTAATGTGCTGAAATCACACTGTTCATTTGTGAGTGATCATAATCTCTGGGTTGTGATGCCATTCATGTCCGGTGGTTTTGAAGAACTTGTCATTGCAACCATACTCCGAGAGGTCTTAAAAGGATTGGAATACCTTCATCATCATGGTCATATCCACCGTGATGTCAAGGCTGGCAATATTCTCATTGATTCACGTGGCAGTATTAAGCTCGGCGATTTCGGTGTCTCTGCTTGTCTTTTCGATTCCGGTGATAGGCAACGCACCAGGAATACTTTTGTTGGAACTCCTTGTTGGATGGCACCCGAGGTCATGGAGCAACTGCATGGTTATAACTTCAAAGCCGACATCTGGTCATTTGGTATAACTGCATTGGAGCTTGCCCATGGTCATGCTCCTTTCTCAAAGTTTCCACCAATGAAGGTACTGCTTATGACTTTACAAAATGCACCCCCTGGCCTTGATTATGAAAGAGATAGGAAATTCTCTAAGTCCTTTAAGCAGATGATTGCTAGTTGCTTAGTCAAAGATCCTACAAAACGACCCTCTGCAAGCAAGTTGTTAAAACATCCCTTCTTTAAGCAGGCTCGCTCCAATGACTATATTGCGCGTACACTTTTGGAGGGGCTACCTGCTTTAGGTGATCGCATGGAGGCCCTAAAGAGAAAAGAAGAAGATATGCTTGCACAAAAGAAAATGCCTGATGGGAAGATGGAGGAATTATCACAGAATGAATACAAACGAGGAATTAGTGGCTGGAACTTCAACCTAGAAGATATGAAGGCTCAGGCTTCCTTGATCCAGGATTTTGACGATGCTATATCAGATATAAGTCATATAGGAAGTTCATGTTCTTTATCTACGCTTGATGGAAATGAGAGGCAATTACCAAATGCAATTCATACCCCTTCACAGTCTGTTGATATGGATGATAAGGATCATCAGATGCAAAACCAGCCAACTTCTGCTCCAGTAGTTGTTTCCTCAGTAAATGATGTCAAGACTGGAGTTGAAAAATCAGATGATGACTCTAGCATCGCCAGTTCAAGCCATGAACAGCAATTTTCACAAAATTCTTCGTCCTGTCTTGATGATCACTCGGACCTTAATTTGGGCGAAAAACCTGATATAGAAAATGGTGGAAGATCTGTTGAAAACATCGCTACCTCTTCTTCTCAGCATCAAAGAAGATGTTCATCAAGCATCTTACCTGAAGTAACTCTTCCACCTATCCGGGCAGAAAGTGACAAGGTAAGAAATCTTCCTCCGAACAGTTCAAATGGTGATGCAACTTCAGTTCCACAGATCGGAGAGGATGTGCTTACTGAACTTCCTTCCAAAGTCTCAAAATCGTCAGCAGGTAATTCCGATGACACTGATGAGAAAGCAAAGGTACCAGTTGTTCAACAGAGAGGACGTTTTAAGGTTACATCTGAGAATGTCGACCCTGACAAGGTGACCCCTTCTGTACTGCAAAAGAGTCACAGCATGCAGGTTGGTGGTTTTGAGGTTATTAGCCAGCATAATGCAGCTCTTCTACCCACAACTTTACCATTATTATCAACACCTGATAATACATCATCAATTCTTTCTGGCTGTTCTTACTCTCTTTTCCCTGTGTTGCACTCTGTGCTGCAGACAAATATTCATCAAAGGGAGACTATTTTAAGTTTAATGAAGCAAATTACTGCTGGTGACCCTCCAGTTATCAATAATACAGCTGATGGTAGTTGTACCCTGGCACAAATAACAGCAATTGAGAAATCCTCGCTTGAAGCAGCTCACGATAGGGAGAAAGAGTTACTTCATGAGATAACCGAGTTGCAGTGGAGGCTCGTATGTACCCAGGAAGAGCTTCAGAAATTGAAAACAGAAAACGCTCAGGTATGA 2130 0.4277 MKDKEKEKEKETSEKKKYPIGAEHYVIYEEIGQGVSASVHRALCIPFHEVIAIKILDFERDNCDLNNVSREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGFEELVIATILREVLKGLEYLHHHGHIHRDVKAGNILIDSRGSIKLGDFGVSACLFDSGDRQRTRNTFVGTPCWMAPEVMEQLHGYNFKADIWSFGITALELAHGHAPFSKFPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPTKRPSASKLLKHPFFKQARSNDYIARTLLEGLPALGDRMEALKRKEEDMLAQKKMPDGKMEELSQNEYKRGISGWNFNLEDMKAQASLIQDFDDAISDISHIGSSCSLSTLDGNERQLPNAIHTPSQSVDMDDKDHQMQNQPTSAPVVVSSVNDVKTGVEKSDDDSSIASSSHEQQFSQNSSSCLDDHSDLNLGEKPDIENGGRSVENIATSSSQHQRRCSSSILPEVTLPPIRAESDKVRNLPPNSSNGDATSVPQIGEDVLTELPSKVSKSSAGNSDDTDEKAKVPVVQQRGRFKVTSENVDPDKVTPSVLQKSHSMQVGGFEVISQHNAALLPTTLPLLSTPDNTSSILSGCSYSLFPVLHSVLQTNIHQRETILSLMKQITAGDPPVINNTADGSCTLAQITAIEKSSLEAAHDREKELLHEITELQWRLVCTQEELQKLKTENAQV* 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g2276 709 CDD STKc_OSR1_SPAK 23 273 - -
Lan6g2276 709 ProSiteProfiles Protein kinase domain profile. 25 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g2276 709 MobiDBLite consensus disorder prediction 374 544 - -
Lan6g2276 709 Coils Coil 685 709 - -
Lan6g2276 709 SMART serkin_6 25 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g2276 709 MobiDBLite consensus disorder prediction 427 446 - -
Lan6g2276 709 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 14 708 - -
Lan6g2276 709 SUPERFAMILY Protein kinase-like (PK-like) 23 274 IPR011009 -
Lan6g2276 709 Gene3D Phosphorylase Kinase; domain 1 13 100 - -
Lan6g2276 709 MobiDBLite consensus disorder prediction 463 482 - -
Lan6g2276 709 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
Lan6g2276 709 Pfam Protein kinase domain 25 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g2276 709 MobiDBLite consensus disorder prediction 499 513 - -
Lan6g2276 709 Gene3D Transferase(Phosphotransferase) domain 1 101 326 - -
Lan6g2276 709 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 14 708 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g2276 Lan-Chr6 32910808 32917840 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g2276 14 691 MAP Kinase Kinase Kinase Kinase AT1G79640 60.714 0.0 793
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Lan6g2276 Pkinase 1.3e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g2276 K08835 - gmx:100780339 1081.63