Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g2274 ATGGCTATTGATAATGAAACAATAAAGCAACAAAAAAAGGACATCATATTCAAGTCCAGGCTTCCTGATATCTACATCCCCAATCACCTTCCTTTACATTCATATTGCTTTGAGAATCTTTCTAAGTTTGGAACAAGACCATGTTTGATTAATGCTCCAACTGGTGAAATCTATACTTACTATGATGTAGAGCTCACTGCAAGAAAAGTTGCCTCAGGACTCAACAAATTAGGCATTCAACAAGGTGATGTGATCATGCTTCTTCTCCCAAACTGTCCACAATTTGTGTTTGCTTTCCTTGGTGCTTCTTTTAGAGGTGCTATTACCACTGCTGCCAACCCCTTTTTTACTCAACCTGAGATTGCTAAACAAGCTAAAGCTTCCAATGCCAAGTTGCTTATAACACAAGGTAGCTACTTTGAGAAAGTCAAGGATTTGTTGGATGTCAAGCTTATGTTTGTGGATTCACCTCCACTTGTACAAGAAGGGCATCTACATTTCTCTGACCTGCTTGAGGCTGATGAGAATCAAATGCCACAAGTAAATATCAACTCTCATGATGTGGTCACATTGCCTTATTCCTCAGGCACAACAGGGTTGCCAAAAGGGGTGATGCTCACACACAAGGGGTTGGTGACTAGCATAGCACAACAAGTGGATGGGGAAAACCCAAACCTTTACTTTCACTCTGAGGATGTTATACTATGTGTGCTTCCTTTGTTTCACATATATTCCCTCAACTCTGTGTTTCTATGTGGGTTGAGAGCCAAAGCTGCAATTTTGTTAATGCCTAAATTTGACATCAATTCCTTGTTTGGTCTTATTGAGAAATACAGAGTTAGTATTGCACCAGTTGTGCCACCCATTGTGTTGGCCATTGCTAAGTCACCAGATCTTGATAAGCATGACACATCTTCCATTAGGGTCTTGAAATCTGGTGGAGCTCCTCTTTCCAAAGATCTTGAACAAACTGTCAGGGCCAAATTCCCCAATGCCAAACTTGGACAGGGATATGGGATGACAGAAGCAGGTCCAGTATTAGCAATGTGCTTAACATTTGCTAAAGAACCAATAGATGTAAAAGCAGGTTCATGTGGAAGCGTAGTTAGAAATGCAGAGATGAAGATTGTGGATCCTGAAACTGATAATTCTTTACCTCGTAATCAACCTGGTGAAATTTGTATTAGAGGTGACCAAGTCATGAAAGGTTATCTAAATGATCCGGAAGCAACAAAGAGAACGATAGACAAAGAAGGATGGTTGCATACAGGCGACATCGGATACATAGATGATGACGACGAATTGTTCATAGTTGATAGGCTTAAGGAATTGATCAAATACAAAGGTTTTCAAGTTGCTCCAGCTGAACTTGAAGCTCTCCTTCTTTCTCATCCTAACATCTCTGATGTTGCTGTCGTCCAAATGAAGGATGAAGCTGCTGGAGAGGTCCCAGTTGCATTTGTTGTGAGATCAAATGCTGATATTGACACAACTGAGGATGAAATTAAGCAGTTCATCTCAAAACAGGTTGTGTTTTATAAAAGAATAAATAGAGTATTCTTCATTGAAGCCATTCCCAAGTCACCTTCAGGCAAAATATTAAGAAAGGATCTAAGGGCTAAGCTTGCAGCAGGGTTTCCAAATTGA 1647 0.4019 MAIDNETIKQQKKDIIFKSRLPDIYIPNHLPLHSYCFENLSKFGTRPCLINAPTGEIYTYYDVELTARKVASGLNKLGIQQGDVIMLLLPNCPQFVFAFLGASFRGAITTAANPFFTQPEIAKQAKASNAKLLITQGSYFEKVKDLLDVKLMFVDSPPLVQEGHLHFSDLLEADENQMPQVNINSHDVVTLPYSSGTTGLPKGVMLTHKGLVTSIAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVFLCGLRAKAAILLMPKFDINSLFGLIEKYRVSIAPVVPPIVLAIAKSPDLDKHDTSSIRVLKSGGAPLSKDLEQTVRAKFPNAKLGQGYGMTEAGPVLAMCLTFAKEPIDVKAGSCGSVVRNAEMKIVDPETDNSLPRNQPGEICIRGDQVMKGYLNDPEATKRTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLLSHPNISDVAVVQMKDEAAGEVPVAFVVRSNADIDTTEDEIKQFISKQVVFYKRINRVFFIEAIPKSPSGKILRKDLRAKLAAGFPN* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g2274 548 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 11 543 - -
Lan6g2274 548 Gene3D - 9 441 IPR042099 -
Lan6g2274 548 CDD 4CL 26 538 - -
Lan6g2274 548 Pfam AMP-binding enzyme 39 447 IPR000873 -
Lan6g2274 548 Gene3D - 442 544 IPR045851 -
Lan6g2274 548 SUPERFAMILY Acetyl-CoA synthetase-like 20 544 - -
Lan6g2274 548 Pfam AMP-binding enzyme C-terminal domain 456 532 IPR025110 -
Lan6g2274 548 ProSitePatterns Putative AMP-binding domain signature. 191 202 IPR020845 -
Lan6g2274 548 PANTHER 4-COUMARATE--COA LIGASE 2-LIKE 11 543 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g2274 Lan-Chr6 32902622 32905104 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g2274 14 510 Monolignol Biosynthesis Gene Families AT1G51680 69.763 0.0 706
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g2274 K01904 - gmx:547944 858.596