Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g2273 ATGAGTATGAGGCCTATTCAACCTCCACCCTCCTCCACCTCCTCTCCCTCCTCCGCTCCTCCTCACCGTCCTCCCCACCGCCGCCGCAAAGACCTCACCCTCCCTCTCCCCCACCGCGACACCAACCTCGCTGTCCCTCTCCCCCTCCCTCCATCCTCCGCCCCTTCCTCCGCCCCCTCCTCCGCCTCCGTCCACCACCACATCCCCTTCTCCGAGCTCGAACGCCTCAACCGTATCGGCAGCGGCAGCGGCGGCACCGTCTATAAGGCCGTTCACCGTCCCACCAACCGACTCTACGCTCTGAAGGTCATCTACGGCCACCACGAGGAGTCCGTACGCCGACAGATCCACCGCGAGATCCAGATCCTCCGTGACGTGGACGACCAGAACGTGGTGAAGTGTCACGACATGTACGACAACAACGCCGAGATCCAGGTCCTGTTAGAGTTCATGGATGGAGGTTCACTCGAAGGGAAGCACATACCTAACGAGCAAAACCTCGCTGATCTTTCTCGTCAAATCCTCCGCGGCCTCTCCTACCTCCACCGCCGCCACATCGTCCACCGTGACATCAAGCCCTCCAACCTCCTCTTCAATTCACGCAAGCAGGTCAAGATCGCTGACTTCGGCGTTGGTCGGATCTTGAACCAGACGATGGATCCGTGCAATTCTTCAGTCGGCACCATCGCTTATATGAGCCCTGAGAGGATCAACACTGACATCAACGATGGACAATATGATGCATACGCTGGTGATATATGGAGCTTTGGGGTTTCCATCTTGGAGTTCTATATGGGGAGATTCCCTTTTGCGGTTGGAAGGCAAGGTGATTGGGCTAGTTTGATGTGTGCTATCTGTATGGCTCCACCACCTGAGGCACCCGTCACTGCCTCGCCGGAGTTTAGGGATTTCGTCTCGAGGTGTTTGCAGAGGGAACCTTCTAGAAGGTGGAGTGCTTCAAGGTTATTGGGACATCCATTCATTGCACAGGGTATTGTTAATCATGGTCAGGTTCATCACAACCTTCATCAGCTTCTCCCTCCACCCAAGCCTCTTTCTTCTTAG 1065 0.5624 MSMRPIQPPPSSTSSPSSAPPHRPPHRRRKDLTLPLPHRDTNLAVPLPLPPSSAPSSAPSSASVHHHIPFSELERLNRIGSGSGGTVYKAVHRPTNRLYALKVIYGHHEESVRRQIHREIQILRDVDDQNVVKCHDMYDNNAEIQVLLEFMDGGSLEGKHIPNEQNLADLSRQILRGLSYLHRRHIVHRDIKPSNLLFNSRKQVKIADFGVGRILNQTMDPCNSSVGTIAYMSPERINTDINDGQYDAYAGDIWSFGVSILEFYMGRFPFAVGRQGDWASLMCAICMAPPPEAPVTASPEFRDFVSRCLQREPSRRWSASRLLGHPFIAQGIVNHGQVHHNLHQLLPPPKPLSS* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g2273 354 Pfam Protein kinase domain 74 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g2273 354 ProSitePatterns Serine/Threonine protein kinases active-site signature. 186 198 IPR008271 GO:0004672|GO:0006468
Lan6g2273 354 CDD PKc_MAPKK_plant_like 71 328 - -
Lan6g2273 354 Gene3D Phosphorylase Kinase; domain 1 54 152 - -
Lan6g2273 354 SMART serkin_6 73 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g2273 354 SUPERFAMILY Protein kinase-like (PK-like) 70 338 IPR011009 -
Lan6g2273 354 MobiDBLite consensus disorder prediction 1 65 - -
Lan6g2273 354 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 24 351 - -
Lan6g2273 354 ProSiteProfiles Protein kinase domain profile. 73 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g2273 354 ProSitePatterns Protein kinases ATP-binding region signature. 79 102 IPR017441 GO:0005524
Lan6g2273 354 Gene3D Transferase(Phosphotransferase) domain 1 155 342 - -
Lan6g2273 354 MobiDBLite consensus disorder prediction 1 21 - -
Lan6g2273 354 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE 4 24 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g2273 Lan-Chr6 32898743 32913810 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g2273 3 344 MAP Kinase Kinase Gene Family AT1G51660 67.978 1.47e-167 470
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Lan6g2273 Pkinase 1.3e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g2273 K13413 - gmx:100786390 546.199