Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g2250 ATGGAGAATTCTGATTCCTCTTCCTTCAACATACCCTCTATCAAGTTCACCAAGCTCTTCATCAATGGAGAATTTGTAGATTCTCTTTCAGGGGAGGAGTTTGAGACAATTGATCCAAGAACAGAAGAAGTAATTGCAAAAATCTCAGAGGGAAGAAAGGAAGACATTGATGTTGCTGTCAAGGCTGCACGTCATGCTTTTGATAATGGCCCATGGCCCCGTATGCCTGGCGTTCAAAGAGCAAAAATTATGATGAAATGGGCAGATATGATTGAAGAAAACATAGAAGAGATATCAGCATTAGAAGCCATTGATGCTGGAAAGTTGTATAGTTGGGTTAAAGCTGTTGATATTCCCTTACTAGCCAATACTATTCGCTACTATGCTGGTGCTGCTGATAAAATTCATGGACAAGTATTAAAAGCATCTATGGAGTTCCATGCATATACATTGATGGAACCAATTGGTGTAGTTGGGCACATTATTCCCTGGAATTTCCCTAGCACCATGTTCGGCGCGAAAGTCGCTCCTTCCCTGGCCGCTGGTTGCACCATGGTCCTCAAGCCTGCTGAACAAACACCTCTTACTGCTTTGTTTTATGCTCATCTAGCAAAGCAGGCCGGAATTCCTGATGGAGTGCTCAATGTAGTACCTGGATTTGGCTCAACTGCAGGAGCTGCATTAAGCTCACACATGGACGTAGATAAGATTAGCTTTACCGGTTCGACAGATGTAGGCCGTGAAGTGATGGTCGCCGCAGCTAGGAGTAATTTAAAACCAGTGTCACTTGAATTAGGAGGCAAGTCACCCATTTTAATTTTTGATGATGCTGATGTAGATAAAGCTGCCGAGCTTGCTCTCTTTGGCTTCCTATTCAACAAGGGAGAAATTTGTGTTGCTGGTACTCGTGTGTTCGTTCAGGAAGGAATCTATGATGAATTTGAGAAGAAATTGGTGGAGAAGGCAAAAGCTTGGGTTGTTGGAGATCCTTTTGATCCTAAATCTCAACAAGGGCCTCAAGCTAACAAGAAGCAATTTGAAAAAATTCTTTCCTATATTGAGCATGGGAAAAGAGAAGGAGCTACCCTTTTGACAGGGGGTAAAAGAGTGGGAGATAAGGGCTACTATATTGAACCTACAATTTTCTCTAATGTTAAGGAGGACATGCTCATAGTACAGGATGAAATATTTGGTCCAGTGCTAGCACTGAAGAAGTTTAAGAGCATTGAGGAAGGAATCATTAGTGCTAACAATTCCAAATATGGCTTAGCATCTGGAATAGTGACCAAGAACATAGATATAGCAAACACTGTATCAAGGTCTATTCGTGCTGGCACTGTGTGGATCAATTGTTATTTTGCCTTTGGGGATGACATTCCTTATGGAGGGTATAAAATGAGTGGATTTGGAAGAGATTATGGATTGGATGCCCTACACAAGTACCTACAAGTTAAATCTGTTGCAACCCCCATTTATAATTCTCCATGGCTTTAA 1494 0.417 MENSDSSSFNIPSIKFTKLFINGEFVDSLSGEEFETIDPRTEEVIAKISEGRKEDIDVAVKAARHAFDNGPWPRMPGVQRAKIMMKWADMIEENIEEISALEAIDAGKLYSWVKAVDIPLLANTIRYYAGAADKIHGQVLKASMEFHAYTLMEPIGVVGHIIPWNFPSTMFGAKVAPSLAAGCTMVLKPAEQTPLTALFYAHLAKQAGIPDGVLNVVPGFGSTAGAALSSHMDVDKISFTGSTDVGREVMVAAARSNLKPVSLELGGKSPILIFDDADVDKAAELALFGFLFNKGEICVAGTRVFVQEGIYDEFEKKLVEKAKAWVVGDPFDPKSQQGPQANKKQFEKILSYIEHGKREGATLLTGGKRVGDKGYYIEPTIFSNVKEDMLIVQDEIFGPVLALKKFKSIEEGIISANNSKYGLASGIVTKNIDIANTVSRSIRAGTVWINCYFAFGDDIPYGGYKMSGFGRDYGLDALHKYLQVKSVATPIYNSPWL* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g2250 497 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 263 270 IPR029510 GO:0016491
Lan6g2250 497 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 267 456 IPR016163 GO:0016620
Lan6g2250 497 SUPERFAMILY ALDH-like 12 493 IPR016161 GO:0016491
Lan6g2250 497 Pfam Aldehyde dehydrogenase family 26 487 IPR015590 GO:0016491
Lan6g2250 497 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 291 302 IPR016160 GO:0016491
Lan6g2250 497 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 3 497 - -
Lan6g2250 497 PANTHER NAD-DEPENDENT ALDEHYDE DEHYDROGENASE FAMILY PROTEIN 3 497 - -
Lan6g2250 497 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 21 485 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g2250 Lan-Chr6 32741776 32745534 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g2250 1 497 Aldehyde Dehydrogenase Gene Family AT3G24503 69.062 0.0 736
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g2250 K12355 - gmx:100783920 872.463