Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g2248 ATGGATGATATGGAAGATGATGCAAGGTATCCTCCAAACTCGTTTTCTTTGAACCGTCAAAACCCTTCCCATCGTCAGAACCTTTATCATCACCATCGCCCAATTCCCACTCGCTACGTAGAAGAATCCGATGACGATGAAGGGCACGATGAATTTGACAATTACGACGCTGAAGAAGATGAATTCGAAGAAGGGCAAAATGGGTATGGTGGTAATTTTGAAAATGATAACGGGTTCGGAAGGAACCCTAGCAAGAAGAGGAAGGTACGAGTTGGTTCCTCTGTTTCAAATTACGAGCTTGCGCCGCGATTGAAAATGTCGTATAATCGAAGTTCTGCGGATGATTGGACAGAACATGCTACTTTTGTACTGTTGGAGGTTTGGGGGGACAAGTTCCTTCAACTTGGGAGGAACAGTTTGAGGATGGAAGATTGGAACGATGTGGCGGAGAAGGTTTCGGAGGAATTGAAGGTGGAAAGAAATGTTTTTCAATGTAGGAACATGTTAGATAAGCTGAAAAGTAGGTATAAGAAGGAAAAGGGTAGAATTAATGAAATGTGTTTGAGTATTAGTAAATGGGCTTATTTCAAGAAAATGGATATGTTGATGGCTTCTTCGTCAAGGCAAGAGTATGGTCTAGCTTGTGGTGTTGATTCGGGTGAATATGTGTTTATGAATACAAGGGTGTATTTGAATAAGTCTAACGGGTTTGATGAGATGAGGGATAGTCCCAGTGAGAGTGAGACTGACGAGGATAATGATGATTCAAAGACGCGGATTTGCGGCAGAGATGATGATGATGATGATGAGACTTCGTATAGGGTGCTGTCTGATTCCATTCAGAAGTTTGGGAAGATATATGAGAAGATTGAGAATAGTAAGAGGAAGCAGATGATGGAGTTGGAGAAGATGAGGTTGGATTTTAATAGGGAGTTGGAGCTGCAGAACAAGCAGATTTTGGAAAGGGCTCAGACTGAGATAGCTAAAATACGGGATGTGCATGAGGTTGAGAGAGAAACTTCGGCCGAGAATCTTAGCGAATGA 1044 0.4224 MDDMEDDARYPPNSFSLNRQNPSHRQNLYHHHRPIPTRYVEESDDDEGHDEFDNYDAEEDEFEEGQNGYGGNFENDNGFGRNPSKKRKVRVGSSVSNYELAPRLKMSYNRSSADDWTEHATFVLLEVWGDKFLQLGRNSLRMEDWNDVAEKVSEELKVERNVFQCRNMLDKLKSRYKKEKGRINEMCLSISKWAYFKKMDMLMASSSRQEYGLACGVDSGEYVFMNTRVYLNKSNGFDEMRDSPSESETDEDNDDSKTRICGRDDDDDDETSYRVLSDSIQKFGKIYEKIENSKRKQMMELEKMRLDFNRELELQNKQILERAQTEIAKIRDVHEVERETSAENLSE* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g2248 347 MobiDBLite consensus disorder prediction 44 65 - -
Lan6g2248 347 Gene3D - 116 178 - -
Lan6g2248 347 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 33 338 IPR044823 -
Lan6g2248 347 MobiDBLite consensus disorder prediction 1 90 - -
Lan6g2248 347 Pfam Myb/SANT-like DNA-binding domain 114 201 IPR044822 -
Lan6g2248 347 MobiDBLite consensus disorder prediction 252 271 - -
Lan6g2248 347 Coils Coil 287 329 - -
Lan6g2248 347 PANTHER ALCOHOL DEHYDROGENASE TRANSCRIPTION FACTOR MYB/SANT-LIKE FAMILY PROTEIN 33 338 - -
Lan6g2248 347 MobiDBLite consensus disorder prediction 235 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g2248 Lan-Chr6 32737922 32739336 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g2248 114 329 Trihelix Transcription Factor Family AT1G54060 30.000 1.46e-18 84.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lan6g2248 Myb_DNA-bind_4 3.4e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g2248 - - ccaj:109813475 447.588