Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g2247 ATGGCAGTGTTAGAGGGCAAAAATGGAGTGAATTTCAGAACCAAGAGAGGGTTTTCAAAGAAACTCAAATCTGGGTTGAAAGAAACTCTATTCCCTGATGACCCTTTCAGACAATTCATGAATGAGGAAAAACTATCACGCAGGTTCATCAAAGGAGTGCAATATTCCATTCCAATATTTCAATGGCTTCCTACATATACTTGGAGACTCTTGATTTCTGACTTCATTGCTGGTCTCACTATTACAAGTCTTGCAATTCCTCAAGGCATAAGCTATGCTAAACTTGCCAACCTTCCTCCTCTTGTTGGTCTTTATTCCAGTTTTGTCCCACCTTTGGTTTATGCTGTTTTTGGGAGTTCTAAGCACATGGCAGTGGGTACTATAGCAGCAGCATCATTGCTTATAGCCCAAACTATTTCAACTGTGGCTGATCCACTTCAAAACCCAACATTGTATCTTCATTTGATTTTTACAACTACCTTTGTCACTGGTATATTCCAGGCTACTTTAGGTATTTTCAGGTTGGGGATATTGGTGGATTTCTTTTCCCATTCTACCATAACTGGCTTCATGGGAGGGACAGCAATAATTCTAATCCTCCAACAACTAAAGGGCATTTTTGGAATGCAACATTTTTCAACCCAAACCGACATAGTCAATGTTATAAAGGGCATTATTACTTATAAACATGAGATCAGGTGGGAAACCACGGTTCTAGGTGTGATCTTCATTCTTTTCCTGCAAATTACTGTATATGTGAGGAATAAAAGGCCAAAGCTCTTTTGGGTATCAGCTATAGCACCAATGTGTACTGTAATAATTACTGCTGTTTTTGTGTACCTAATTAAGGGCCAGAATCATGGAATTCAAACTGAAGGAATAGCAATTGGAAGAAGCTTTGCTGTTGCTGAAAATACACCCCATGATGGAAACAAAGAGATGATAGCTTTTGGTCTTATGAACATAGTTGGTTCTTTCACTTCATGTTACCTCACTAGTGGGCCATTTTCCAAAACAGCTGTGAATTACAATGCAGGGTGTAAAACTCCTATGGCAAATATAGTACAAGCAATTTTGATGGCACTCACACTACTGTTTTTGGCACCACTATTTGGCCACACCCCTCTTGTTGCTCTATCATCTATTATCATATCAGCCATGTTGGGTCTTATTAAATATGAAGAAGCTATTCATCTCTTCAAAGTTGATAAATTTGATTTTGTTATTTGCATGGCTGCATTCTTTGGAGTACCCTTCCTAAGCATGGATTATGGCCTCATGATGTCTGTTGGACTTGGTATACTTAGAGGACTCTTATATGTGGCTAGACCTGCAACATGCAAGCTTGGAAATATTCCTGACACTGGCTTATATCGAGATGTTGAGCAATACAATGCTACAACACTTCCAGGAGTTCTAATTATACAACTTGGTTCTCCCATTTACTTTGCAAATGCTATATATGTAAAAGAAAGGATTATGAGGTATATTCAAAGTGAGGAAGAGAACGGCGGAAATACTGTTGAGAACATCATAATCGATTTGTCAGGAGTGACATCAATTGACACAACTGCTATTGGAGGATTATTGGAGACAAATAAAACATTGGAAAAGAATGGAGTTCAGATGTGCTTTGTAAACCCAAGGCTTGAGGTTATGGAGAAGTTGATAGCATCAAAGTTTGTTGATAAGATTGGAAAGGATTCATTCTTTCTGTCACTGGAAGATGCAGTTTCAGCAATACAATATGCACTTAGTAGAGTGAAGAGAAATAGCTCAAGTGAAGGGTTTTCTGAAGAAGCTCATAATTATGCTTAG 1818 0.3834 MAVLEGKNGVNFRTKRGFSKKLKSGLKETLFPDDPFRQFMNEEKLSRRFIKGVQYSIPIFQWLPTYTWRLLISDFIAGLTITSLAIPQGISYAKLANLPPLVGLYSSFVPPLVYAVFGSSKHMAVGTIAAASLLIAQTISTVADPLQNPTLYLHLIFTTTFVTGIFQATLGIFRLGILVDFFSHSTITGFMGGTAIILILQQLKGIFGMQHFSTQTDIVNVIKGIITYKHEIRWETTVLGVIFILFLQITVYVRNKRPKLFWVSAIAPMCTVIITAVFVYLIKGQNHGIQTEGIAIGRSFAVAENTPHDGNKEMIAFGLMNIVGSFTSCYLTSGPFSKTAVNYNAGCKTPMANIVQAILMALTLLFLAPLFGHTPLVALSSIIISAMLGLIKYEEAIHLFKVDKFDFVICMAAFFGVPFLSMDYGLMMSVGLGILRGLLYVARPATCKLGNIPDTGLYRDVEQYNATTLPGVLIIQLGSPIYFANAIYVKERIMRYIQSEEENGGNTVENIIIDLSGVTSIDTTAIGGLLETNKTLEKNGVQMCFVNPRLEVMEKLIASKFVDKIGKDSFFLSLEDAVSAIQYALSRVKRNSSSEGFSEEAHNYA* 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g2247 605 CDD STAS_SulP_like_sulfate_transporter 464 574 - -
Lan6g2247 605 ProSiteProfiles STAS domain profile. 462 581 IPR002645 -
Lan6g2247 605 Pfam Sulfate permease family 71 290 IPR011547 GO:0016021
Lan6g2247 605 Pfam Sulfate permease family 291 413 IPR011547 GO:0016021
Lan6g2247 605 Pfam STAS domain 464 577 IPR002645 -
Lan6g2247 605 Gene3D STAS domain 443 584 IPR036513 -
Lan6g2247 605 SUPERFAMILY SpoIIaa-like 463 581 IPR036513 -
Lan6g2247 605 ProSitePatterns SLC26A transporters signature. 100 121 IPR018045 GO:0008271|GO:0008272
Lan6g2247 605 PANTHER SULFATE TRANSPORTER 3.5-RELATED 291 590 IPR030316 GO:1902358
Lan6g2247 605 PANTHER SULFATE TRANSPORTER 3.5-RELATED 6 290 IPR030316 GO:1902358
Lan6g2247 605 PANTHER SULFATE TRANSPORTER 6 290 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lan6g2247 605 PANTHER SULFATE TRANSPORTER 291 590 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g2247 Lan-Chr6 32729990 32735492 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g2247 8 589 Inorganic Solute Cotransporters AT5G19600 56.822 0.0 714
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g2247 K17471 - gmx:100789107 841.647