Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g2234 ATGGAAGAGAGTGAGGAGGGTGATTGCACTTCAAATAATGTGATTCCATCTGAAGTTGTTGCTTCAGAGGCAGCAACGACGCCGTTGGATGTTCCGGCCAAGAAGCTGGCAAGGCAGCTTGATTTCACAGCCTCCCAATCGCAACCGCAGCTGCAGTCTTTGATGCTGCAACCGGTGGATGTGATGCCAGTGCTGCGGCCGCTACCTCATCCTTCTGTGAGGGTTGGGAAACCAGATTCTCCAAAATCAAGATCGAGACCTAACTTCGAAGTGAAAGACATTACTCCTAAGAAAAAAAAGCAGTGCAATTGTAAACACTCTAAATGCTTAAAGCTATATTGTGAATGTTTTGCATCTGGAATATATTGTGATGGTTGCAACTGCATAAATTGTTTTAACAATGTTGAAAATGAAGCTGCTAGACGAGAAGCTGTTGAAGCTACTTTAGAGCGCAATCCAAATGCATTTAGGCCAAAAGTTGCGAGCAGCCCTCATGGGATACATGATACAAGGGAGGAGGCTGGGGAAGTTTTAATATTAGGAAAGCATAATAAGGGTTGCCATTGCAAAAAATCTGGGTGCCTCAAGAAGTACTGTGAATGCTTCCAAGCCAACGTTCTTTGTTCTGAAAATTGTAAATGCATTGACTGCAAGAATTTCGAAGGAAGTGAAGAGAGACAGGCTTTGTTTCATGGTGATCAAAATAAAAACATGGCATATATTCAGCAGTCAGCAAATGCTGCTGCCATAACAGAAGCTATTGGTCCTTCTGGTTATTCATCGCCTCCAGGATCCGTCAAGAAAAGAAGACGTCAGGGACCCTTCGTTGGACCAACAACCAAGGATCCATCCATTAGCCAGTTGGGACAACAGGTAAACCATGTCAGGGGTCCAGTACCTAGCTCATCCTTGTCTTCTATCCAAAGAGCTCATGTTGGAACCGCAATGTTAGGTCCTTCAAAATTTATGTACAGATCTCCTTTAGCAGACATCATACAACAACAGCACCTGAAGGAGCTTTGCTCAGCTCTGGTGCTAGTATCTGGGCAAGCTGCAAAGCTGGTTACAGATCATAAAATTTCAATGGAGAGGCATACAGAAGATCAAATAGAAACTTCCCTTACTTCTTCCACTCAAGAGCAGTTACCAAGTCAAATGGATGGTGAAGTTGGAAAAACTTCGGCTGATGATTGTTTGAGTGCAAACAAAACAGATAAAATCAGCCCAGATAATTCCAGTTCAGATGGCACTGATATCTCGAAAGGGAGGCCAATGTCTCCTGGGACGTTAGCTTTGATGTGCGATGAGCAAGATACAATGTCCATGACAGCTGCTTCCCCTGTTGGGTCAATGTCCCATGCCTGCAGCACATCTTCGCAATTTCCCTATGGTCAAGGAATGACATTGGTCTATGCTGAGCAAGAAAGAACCGTATTAACAAAGTTCAGAGATTTTCTCAATGGGGTTATCAATATGGGAGAAATAAATGAGACAAAGTGTTCTTCATTTGCCATAAGTGAATCAGAGAGTCAAAAAGACTCAATCAACAATAGCACTAGAATTGCCAGTACTGAGACAGTGCATCAGCAGCGAGCCGGATGCAATGGTGTTGACAAAGCTGTTCCACATGTGGCCGCAACTTCAGCATCTATTATCCCTGAAATGAAGAATTCTTCATTTGGTAGAAGTGAATTAGAGAGTCAAAAGGACCCACTCATAGTGGTGAATGGGGAGACACTCACTCATAATGGTGATAACAAAGCTATTGTTCCACCTGTGGCCGCAACTTCACCATCTATGATTGATGACCTGAAGTTCAAAACTAAGAAGGATGTGCAGAGATAA 1845 0.4331 MEESEEGDCTSNNVIPSEVVASEAATTPLDVPAKKLARQLDFTASQSQPQLQSLMLQPVDVMPVLRPLPHPSVRVGKPDSPKSRSRPNFEVKDITPKKKKQCNCKHSKCLKLYCECFASGIYCDGCNCINCFNNVENEAARREAVEATLERNPNAFRPKVASSPHGIHDTREEAGEVLILGKHNKGCHCKKSGCLKKYCECFQANVLCSENCKCIDCKNFEGSEERQALFHGDQNKNMAYIQQSANAAAITEAIGPSGYSSPPGSVKKRRRQGPFVGPTTKDPSISQLGQQVNHVRGPVPSSSLSSIQRAHVGTAMLGPSKFMYRSPLADIIQQQHLKELCSALVLVSGQAAKLVTDHKISMERHTEDQIETSLTSSTQEQLPSQMDGEVGKTSADDCLSANKTDKISPDNSSSDGTDISKGRPMSPGTLALMCDEQDTMSMTAASPVGSMSHACSTSSQFPYGQGMTLVYAEQERTVLTKFRDFLNGVINMGEINETKCSSFAISESESQKDSINNSTRIASTETVHQQRAGCNGVDKAVPHVAATSASIIPEMKNSSFGRSELESQKDPLIVVNGETLTHNGDNKAIVPPVAATSPSMIDDLKFKTKKDVQR* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g2234 614 MobiDBLite consensus disorder prediction 397 420 - -
Lan6g2234 614 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 99 134 IPR005172 -
Lan6g2234 614 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 185 219 IPR005172 -
Lan6g2234 614 PANTHER TESMIN/TSO1-RELATED 63 548 IPR028307 -
Lan6g2234 614 MobiDBLite consensus disorder prediction 67 92 - -
Lan6g2234 614 MobiDBLite consensus disorder prediction 364 429 - -
Lan6g2234 614 ProSiteProfiles CRC domain profile. 98 222 IPR005172 -
Lan6g2234 614 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 5 ISOFORM X1 63 548 - -
Lan6g2234 614 MobiDBLite consensus disorder prediction 77 92 - -
Lan6g2234 614 MobiDBLite consensus disorder prediction 1 28 - -
Lan6g2234 614 MobiDBLite consensus disorder prediction 258 286 - -
Lan6g2234 614 SMART CXC_2 97 137 IPR033467 -
Lan6g2234 614 SMART CXC_2 182 223 IPR033467 -
Lan6g2234 614 MobiDBLite consensus disorder prediction 371 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g2234 Lan-Chr6 32624917 32632137 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g2234 31 504 CPP Transcription Factor Family AT4G29000 54.231 4.69e-171 498
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Lan6g2234 TCR 1.6e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g2234 - - lang:109358342 963.37