Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g2226 ATGGACCCTCCTCAACCCAATTTCAGCACCATCCAAACCCGACCCGACATCACATCCAAATACCAAATCCTAAACCGGGTCGGGTCCGGTTCCTACGCCGACGTCTACCGTGCCCGCCGCCTCTCCGACGAAACAACGGTAGCTCTAAAAGAAGTCCACGACCAACAATCAGCGTTCAGAGAAATCGAAGCGTTAAGGATCCTTCAAGGGTCACGAAACGTCGTCGTAATGCACGAGTTCTTCTGCTGTGAGGGTGAGGATGTTGTGATTGTTCTCGAGTTTCTGAGGAGTGATCTTGTGAGTGTCATGAAGGAGAGTGGTAATGGGGAAATGGGTGTTGGAAAAGTGAAGAGGTGGATGATGCAGATTCTGAGTGGGGTTGATGCGTGTCATAGGAATATGATCTTGCATAGGGATTTGAAACCGAGTAATTTTTTGATTTCTGATGATGGGGTGCTTAAGTTGGCTGATTTTGGACAGGCAAGGATACTAATGGAGCCTGGATTTGATGCTACAGAAGAAAACCCAGCACCACCATATGAGCTAGATTCTTCAACTAGTGAAACTTCACTTCAACGTCCCAAGGCTTTTCCCGAGTCAGACAGCTTAAACCAAACAGGATATGGAGGAAATCAAGAACATGGAACCACAAGTCATGAAGAATATTTTAGAGTTTTAGATGAGCTGAAGACTAAAAGCTCCATCTATGACACTGACAAGGATACAAACATCGGTGATGGAAATAATTCTTGTCTTGCAACATGCACAACAAATGACACAGATGATGAAATCTGGAAAGATACTTTTACGTACGAAACCGATGAAGGAGGGAATGAACTCGGTTGCCTCACATCATGCGTCGGATCTCGTTGGTACAAGGCTCCTGAACTACTTTACGGATCCACGGACTATGGTTTAGAGGTTGATCTCTGGTCTTTGGGGTGTATATTTTCTGAGCTCTTAACTCTCAAGCCTTTGTTTCCTGGAACATCTGATATAGATCAACTCAGTAGAATTATCAGTGTAATGGGCAACCTCGATGTGGAAGCTTGGCCTGGTTGTTCTAAGCTTCCTGATTATACAAGAATCTCATTTAGTAAGGTGGAAAACCCTCCTGGTCTTGAAGCATGTCTGCAGGATCGGTCGGCCGATGAAGTGTCTCTAGTGAAAAAGCTGCTTTGTTATGATCCTTCTAAGAGAGCCACAGCAATGGAGTTACTTCATGACAAGTACTTCAATGAAGAGCCTTTTCCTGTTCCTATTTCTGAGCTAAAGGTTCCAAGAGGAGGGTGA 1293 0.4478 MDPPQPNFSTIQTRPDITSKYQILNRVGSGSYADVYRARRLSDETTVALKEVHDQQSAFREIEALRILQGSRNVVVMHEFFCCEGEDVVIVLEFLRSDLVSVMKESGNGEMGVGKVKRWMMQILSGVDACHRNMILHRDLKPSNFLISDDGVLKLADFGQARILMEPGFDATEENPAPPYELDSSTSETSLQRPKAFPESDSLNQTGYGGNQEHGTTSHEEYFRVLDELKTKSSIYDTDKDTNIGDGNNSCLATCTTNDTDDEIWKDTFTYETDEGGNELGCLTSCVGSRWYKAPELLYGSTDYGLEVDLWSLGCIFSELLTLKPLFPGTSDIDQLSRIISVMGNLDVEAWPGCSKLPDYTRISFSKVENPPGLEACLQDRSADEVSLVKKLLCYDPSKRATAMELLHDKYFNEEPFPVPISELKVPRGG* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g2226 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672|GO:0006468
Lan6g2226 430 SUPERFAMILY Protein kinase-like (PK-like) 6 421 IPR011009 -
Lan6g2226 430 MobiDBLite consensus disorder prediction 179 216 - -
Lan6g2226 430 PANTHER CELL DIVISION PROTEIN KINASE 18 419 - -
Lan6g2226 430 Gene3D Transferase(Phosphotransferase) domain 1 10 192 - -
Lan6g2226 430 MobiDBLite consensus disorder prediction 169 217 - -
Lan6g2226 430 SMART serkin_6 21 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g2226 430 Gene3D Transferase(Phosphotransferase) domain 1 227 426 - -
Lan6g2226 430 PANTHER CYCLIN-DEPENDENT KINASE 10 18 419 - -
Lan6g2226 430 ProSiteProfiles Protein kinase domain profile. 21 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g2226 430 Pfam Protein kinase domain 283 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g2226 430 Pfam Protein kinase domain 21 166 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g2226 430 ProSitePatterns Protein kinases ATP-binding region signature. 27 50 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g2226 Lan-Chr6 32569350 32572087 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g2226 5 427 Core Cell Cycle Gene Families AT4G28980 60.138 0.0 521
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CCRK Lan6g2226 Pkinase 1.5e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g2226 - - gmx:548056 615.92