Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g2224 ATGGGTTGTATTTACTCTAAAGTTTGCATAGGTGACATTTGCAAAGATTCTAGCATCAATGGTGATGCTATTACAAGACCTGTTGTGCTTTCTGAAACATCTTCTGATGTTCAAGAAGGTGAATTCAGAGACCAATTGAACCAATTGAGTTTAAGTAGAGACCCTGAAGCTGGAATCAGAAGGCTAGCTAGAGTTTCAGCACAATTTCTTCCACCAGATGGGTCACGTATAGTTAAGGTACCTTCAAATAGCTATGAATTGAGGTATTCGTATTTGTCGCAGCGAGGTTATTACCCGGATGCTCTGGATAAGGCTAATCAGGACAGTTTCTGCATCCACACGCCGTTTGGAACGAGTCCTGATGACCATTTCTTTGGAGTTTTTGATGGCCATGGCGAATTTGGAGCGCAGTGTTCGCAGTTCGTGAAGAGCAGGTTGTGTGAGAATTTACTCAGGAACAGTAAGTTTCATGTTGATGCTGTAGAGGCTTGTCACGCAGCAGTCTTGGCTACTAATTCACAATTGCATGCTGATATTTTGGATGATAGCATGAGTGGCACGACTGCGATCACAGTGTTGGTACGGGGTAGGACAATATATGTGGCGAATTCTGGTGACTCGAGGGCAGTGATTGGAGAGAGGAGAGGGAAGGAATTAGTGGCGGTTGATTTGTCAATTGATCAGACACCTTTTAGGCCCGATGAGCTTGAGAGGGTGAAGCTTTGTGGAGCTAGGGTTCTTACTTTGGATCAGATTGAAGGGCTTAAGAACCCTGATGTTCAGTGTTGGGGCACTGAAGAAGCTGATGATGGTGACCCTCCGAGGCTGTGGGTGCCCAATGGGATGTACCCAGGTACAGCTTTTACAAGGAGCCTAGGCGACTCTGTTGCCGAGTCTATTGGTGTTGTTGCTAACCCGGAGATTATTGCCTTTGAGCTCACAAAAGATCACCCTTTCTTTGTGATTGCCAGTGATGGAGTGTTTGAGTTTCTGTCTAGCCAAACGGTTGTTGAAATGGTTGCAAAATTCAAAGATCCTCGTGATGCTTGTGCTGCAATAGTCGCTGAATCTTATCGACTCTGGCTACAGTATGAAACTCGTACAGATGATATTACAGTAATTATTGTGCATATCAATGGGCTAACTGAACCTGCTGTCGGTCAGTCAGCAAGTTATGATGAAGTTTTACAAACTCGAGTGCCTCAAGTTGTAGAGATGACAGGTTCAGAATCTCCTTCCACCTTTGGCTGGAACTGTAGGAACCAACGTGTAAGGCGTGACTTGTCAAGGGCACGCGTCCGAGCAATTGAAAATTCCCTAGAGAATGGGCAAGCTTGGGTTCCTCCATCTTCAGCCCACAGGAAGACATGGGAAGAAGAAGCACACATAGAGCAGGTGTTGCATGATCATTTTCTCTTCCGAAAACTTACTGATTCCCAATGTCATGTTTTGTTGGATTGTATGCAAAGAGTTGAGGTTGAACCTGAAGATATTATAGTACATCAGGGTGGCGAAGGTGACTCTTTTTATGTTGTTGGCAGTGGAGAATTTGAGGTCCTGGCAACTCAGGAAGAAAAAGATGGGGAGGTACCTAGAGTTTTGCAGCGCTATACAGCTGAAAAACTATCCTGCTTTGGGGAACTTGCTTTAATGTACAATAAACCACTCCAGGCCTCTGTACGTGCTGTAACAAAAGGAAATCTCTGGGCATTAAAGCGAGAAGATTTTCGAGGGATTTTAATGTCAGAGTTCTCTAATTTATCATCGCTGAAGTTGCTTCGCTCCGTAGATCTCCTCTCTAGGCTGACAATTTTGCAACTGAGTCAGATTTCAGACTCCCTTTCTGAAGTTTCCTTCTCAAGTGGGCAGACAATAATTGATAAAGATGAAGCCCTTGCATTATATATTATCCAAAAGGGACAAGTGAAAGTCACTTTTGGTGCTAAAGTATTGACAAGTCCAAATGCCTGCAGCCTCAAGCCTGACATCCAAAATTTGGACGATGACAAACTCGGTGGAAGAGAATTATCAATAGAGAAGCCTGAGGGAAGTTATTTCGGTGAATGGGCCCTTGTTGGTGAACATATTGGTTCCTTAAGTGCTGTAGCTGTTGGTGACGTTGTATGTGTTGTACTAACAAAGGAGAAATTTGAATCAGTCGTTGGCTCCATACGAAAGCTTTCACATGAAGATCTCAAGTTTAAGGATAATTCCAAGCAGTTGATTGGAAACTTTGACTTTTCATCCCTTGATAAAGTCCAGCTCTCAGATTTGGAGTGGAGGAAGACCCTATATTCCACTGACTGCTCTGAGATTGGGATTGCAAATTTAAGAAACTCAGAAAATTTGTTGACATTGAAGAGATTTTCTAAGTCAAGAGTGAAAATACTAGGAAAGGAAGCACAAGTCTTGAAAGAGAAAGACTTGATTAAGGGTATGAGCTCTTCAGCTTGTATACCACAGGTTTTACGCACTTTTGCTGACCACATATATGCTGGAATACTGCTAAATACATGTCTTGCTTGCCCTTTGTCTTCCATACTTTCAAGTCCTTTTGGTGAATCAGCAGCACAATTCTGTGCTGCTGCTGTTGTTAATGCTTTGGAAGACTTGCACAAGAATGGTGTTCTCTATAGAGGTGTGTCACCTGATGTTTTGATGTTGGACCAAATGGGACAGATACAGCTGGTGGACTTCAGATTTGGTAAGAGGCTGTGTGATGAGAGAACATTCACAATTTGTGGGACAGCAGATACGCTAGCTCCAGAGATTGTTTTGGGAAAAGGACATGGTTTCCCTGCTGACTGGTGGGCATTGGGAGTTTTAATATATTTTATGTTACGGGGTGAAATGCCATTTGGGTCATGCAGGGAAAATGAAGTTGATACAGTTGCCAAAATTGCAAAACGGAAGCTATATCTTCCAGAGACTTTCAGCGACGAAGCTGTTGATCTCATCTCCAAGTTACTTGATGCTGAAGAAAACACTAGACTTGGTAGCCAAGGTCCTGATTCTGTCAAGAATCATCCATGGTTTAGTGGTGTTGACTGGGAAGGGATGAGACACCATACAAGTCCCGTTCCCGAGGAAATTATTTCTCGCGTAACACAATACTTGGATGTTCATTCTGAGAATTGTACTGGTTCTCTAGTTTCCCCACCACAGGAAGTAGAAGAACTTAATGTGCCTGAATGGCTTGAAGACTGGTAA 3210 0.4321 MGCIYSKVCIGDICKDSSINGDAITRPVVLSETSSDVQEGEFRDQLNQLSLSRDPEAGIRRLARVSAQFLPPDGSRIVKVPSNSYELRYSYLSQRGYYPDALDKANQDSFCIHTPFGTSPDDHFFGVFDGHGEFGAQCSQFVKSRLCENLLRNSKFHVDAVEACHAAVLATNSQLHADILDDSMSGTTAITVLVRGRTIYVANSGDSRAVIGERRGKELVAVDLSIDQTPFRPDELERVKLCGARVLTLDQIEGLKNPDVQCWGTEEADDGDPPRLWVPNGMYPGTAFTRSLGDSVAESIGVVANPEIIAFELTKDHPFFVIASDGVFEFLSSQTVVEMVAKFKDPRDACAAIVAESYRLWLQYETRTDDITVIIVHINGLTEPAVGQSASYDEVLQTRVPQVVEMTGSESPSTFGWNCRNQRVRRDLSRARVRAIENSLENGQAWVPPSSAHRKTWEEEAHIEQVLHDHFLFRKLTDSQCHVLLDCMQRVEVEPEDIIVHQGGEGDSFYVVGSGEFEVLATQEEKDGEVPRVLQRYTAEKLSCFGELALMYNKPLQASVRAVTKGNLWALKREDFRGILMSEFSNLSSLKLLRSVDLLSRLTILQLSQISDSLSEVSFSSGQTIIDKDEALALYIIQKGQVKVTFGAKVLTSPNACSLKPDIQNLDDDKLGGRELSIEKPEGSYFGEWALVGEHIGSLSAVAVGDVVCVVLTKEKFESVVGSIRKLSHEDLKFKDNSKQLIGNFDFSSLDKVQLSDLEWRKTLYSTDCSEIGIANLRNSENLLTLKRFSKSRVKILGKEAQVLKEKDLIKGMSSSACIPQVLRTFADHIYAGILLNTCLACPLSSILSSPFGESAAQFCAAAVVNALEDLHKNGVLYRGVSPDVLMLDQMGQIQLVDFRFGKRLCDERTFTICGTADTLAPEIVLGKGHGFPADWWALGVLIYFMLRGEMPFGSCRENEVDTVAKIAKRKLYLPETFSDEAVDLISKLLDAEENTRLGSQGPDSVKNHPWFSGVDWEGMRHHTSPVPEEIISRVTQYLDVHSENCTGSLVSPPQEVEELNVPEWLEDW* 1070
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g2224 1069 Pfam Cyclic nucleotide-binding domain 491 582 IPR000595 -
Lan6g2224 1069 Pfam Cyclic nucleotide-binding domain 617 721 IPR000595 -
Lan6g2224 1069 ProSitePatterns PPM-type phosphatase domain signature. 124 132 IPR000222 GO:0043169
Lan6g2224 1069 SMART cnmp_10 598 736 IPR000595 -
Lan6g2224 1069 SMART cnmp_10 472 595 IPR000595 -
Lan6g2224 1069 PANTHER PROTEIN PHOSPHATASE 2C AND CYCLIC NUCLEOTIDE-BINDING/KINASE DOMAIN-CONTAINING PROTEIN 31 1069 - -
Lan6g2224 1069 Gene3D Phosphorylase Kinase; domain 1 756 842 - -
Lan6g2224 1069 SUPERFAMILY cAMP-binding domain-like 590 724 IPR018490 -
Lan6g2224 1069 SMART serkin_6 766 1012 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g2224 1069 Gene3D - 78 379 IPR036457 -
Lan6g2224 1069 ProSiteProfiles cAMP/cGMP binding motif profile. 598 722 IPR000595 -
Lan6g2224 1069 CDD CAP_ED 598 701 IPR000595 -
Lan6g2224 1069 SMART PP2C_4 80 376 IPR001932 -
Lan6g2224 1069 CDD PP2Cc 104 378 IPR001932 -
Lan6g2224 1069 SUPERFAMILY PP2C-like 76 380 IPR036457 -
Lan6g2224 1069 CDD CAP_ED 472 581 IPR000595 -
Lan6g2224 1069 ProSiteProfiles cAMP/cGMP binding motif profile. 472 581 IPR000595 -
Lan6g2224 1069 Pfam Protein phosphatase 2C 117 357 IPR001932 -
Lan6g2224 1069 ProSiteProfiles Protein kinase domain profile. 736 1012 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g2224 1069 Pfam Protein kinase domain 778 1012 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g2224 1069 Gene3D Jelly Rolls 586 739 IPR014710 -
Lan6g2224 1069 Gene3D Jelly Rolls 437 580 IPR014710 -
Lan6g2224 1069 PRINTS cAMP-dependent protein kinase signature 493 507 - -
Lan6g2224 1069 PRINTS cAMP-dependent protein kinase signature 508 522 - -
Lan6g2224 1069 PRINTS cAMP-dependent protein kinase signature 543 552 - -
Lan6g2224 1069 SUPERFAMILY cAMP-binding domain-like 437 582 IPR018490 -
Lan6g2224 1069 SUPERFAMILY Protein kinase-like (PK-like) 751 1043 IPR011009 -
Lan6g2224 1069 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 31 1069 - -
Lan6g2224 1069 Gene3D Transferase(Phosphotransferase) domain 1 843 1027 - -
Lan6g2224 1069 ProSiteProfiles PPM-type phosphatase domain profile. 88 378 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g2224 Lan-Chr6 32548828 32556772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g2224 1 1069 PP2C-type Phosphatase Gene Family AT2G20050 67.792 0.0 1465
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PKA-PKG Lan6g2224 Pkinase 4.5e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g2224 - - gmx:100799821 1820.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan3g0291 3 1963942 1972268 Lan6g2224 6 32548828 32556772 LSH