Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g2216 ATGAAAAAATCATCAAAATCTTTTGTGAAATTCTCATCATACTCTCTTCTATTCTTCTTTCTCATCCTGAACCATGCAAAATCATATTCTGATATGTATAATGAAGAACATATAGTCCTAATGAATATAAAACAGTACCTACAAAACCCACCATATCTTAGTCATTGGACCCTATCAAACTCTTATCATTGTTCTTGGCCAGAACTAAACTGCACCAATGATTCTGTTACTGGGTTATCTCTTGTTGAGTGTAATATCAACCACACAATACCAACTTTCATATGTGACCTCAAAAATCTCACACATATTGATTTCAGTGCCAATTCTATTCCTGGAGAGTTTCCAAGATATCTTTATAATTGTTCCAAGCTTGAATATTTGGACTTGTCTATGAATAACTTGTATGGCAAGGTTCCTGAAGATATTGAAAGTTTGTCTAGTTTGCAGTATCTTAACCTTGGTTCAACCAATTTTTATGGTGATATTCCTGTGAGTATTGGAAGGTTAAAGGATCTTAGAGTACTTCAACTTCAATATTGTTTGTTCAATGGAACTTATCCTGATGAAATTGGCAACTTGTCTAATCTTGAAACCTTGGATTTGTCCTCTAACTTTGAGCTCCCTCGGTCGAGTTTGCCATCGAGTTGGACTAAGTTGAGCAAATTGAAGGTGTTTTATATGTATGGCTGCAACTTGGTTGGTGAAATTCCTGAAACCATTGGAGAAATGGTTGCATTGGAGAAGTTGGATATGTCAGAAAACAATTTATCTGGGCAGATTCCGAAAAGTTTGTTATTGCTGAAGAATCTGACCAAGCTATATCTTCAACACAATAGTCTATCTGGAGAGATACCTGATGCGATTGAAGCGTTAAACTTAACCGCTATCGATCTCACGAAGAATAATCTAACAGGGAAAATACCTGATGATTTTGGAAAGCTCACAAAGTTAACAGGCTTGTGCTTGTCTACAAATAAGTTGTCAGGGGAGATACCAGAAAACATAAGCCGTTTCCCGTATCTGAAAGATTTTCGTGTCTTTTTCAACAATTTATCAGGTACTCTTCCTCCTGATTTTGGCCGATTCTCGAAGCTAAGATCCTTCCACATCTGTTCCAATAAATTTTCAGGAAGGCTACCAGAGAATTTATGCTATTATGGTGAGTTACTTAATTTTACTGCTTATGACAATAATCTCAGTGGAGAGTTGCCACAATCACTAGGGAATTGTAGTAGCCTGGAGGACTTCAAAATTTACAATAATCAGTTTTCGGGTAACATTCCTAGTGGTCTTTGGAAATCTTCCAATTTGTTAAATTTCATGGTGAGTCAGAATAAGTTTACTGGTGAACTTCCAGATAGATTATCTTCAACTATTTCACGCTTCGAGATAAGTTACAATCAGTTTTCGGGTAGAATTCCTGCTGGAGTATCTTCCTTGAAGAATGTTGTAGTGTTCAATGCCAGTAAGAATTTCTTCAATGGAAGTTTTCCTCAAGAGCTAGCAACTCTTTCCACGCTAACAACTCTTTTGCTAGACCAGAATCATCTCACTGGGTCAATTCCATCAGATATAATTGCGTGGAAGTCGTTAGTGACTCTTAATTTGAGCGAAAACCAATTCTTCGGGCAAATTCCAGATACAATTGGTAACTTACCTGTCCTTAGTCAGCTTGATCTGTCCAAAAATCAATTCTCTGGAAAAATTCCTTCTAAACTTCCTATACTCACCAATCTCAATCTGTCCTCGAATCGTTTGACAGGGCGAATTCCGAGCGAATTTGGAATATCTGCATTTGCCAGCAGCTTTTTGGACAATCCTGGTCTTTGTACTGATAACCCAGCACTGAACCTTACCTTGTGCAACACCGGTCCTCCAAGGCGAACCGAAGGTTCATCTTGGTCTCTCCCTTTGATTGTAAGCCTGATAGCAGTATTCTTTGGATTGGCTTTGCTGGCATCACTCTTGATCATTAGACTCTTCAGAAAAAGAAAGCAAAGATTGGATAACTCATGGAAGCTCATTTCCTTTCAAAGGCTGAGTTTCACAGAATCAAACATAGTTTCATCATTGACAGAACATAATATCATCGGCCGTGGTGGATATGGCACAGTATACCGCGTCCCTGTCGATGATTTAGGCTATGTTGGTGTGAAAAAGATTTGGAATAACAGAAAGTTAGACAAGAGGCTAGAGAGTTCCTTTCATGCCGAAGTTAAAATATTGAGCAATATTCGCCATAACAACATTGTGAAGTTGTTGTGCTGTATCTCCAATCAGGACTCTATGCTCCTTGTATACGAATATCATGAAAACCGAAGCCTCGATAGGTGGCTATGCAAGAAGAGTAAGTCATCCGGCATGTCAGGTTCAGTCCACCATGTTGTAATTGATTGGCCGAAGAGATTGAAAATTGCCACTGGGATTGCTCAAGGTTTGTGCTATATGCACCATGATTGTTCACCACCTATTGTTCATAGAGATGTGAAAACAAGCAACATACTTTTGGATGTTCAATTCAATGCAAAAGTTGCTGATTTTGGTTTGGCTAGGATGTTGATCAAGCCCGAAGAACTTGAGACCATGTCAAATGTTGTTGGCTCTTTTGGATATATTGCTCCAGAATATATTAAAACAACCCGAGTCAGCGAAAAGGTTGATGTCTTCAGCTTCGGGGTTATCTTATTGGAACTGACAACTGGGAAAGAAGCTAACTATGGAGATGAACACTCATCTCTTGCAGAGTGGGCATTGCGCCATGTTCAGTTAGGAACCGATATAGAAGAACTGCTAGACAAAGATGTAATGGAACTCAGTAATGTGGATGAAATGTGCAGTGCTTTCAAACTTGGGATTATGTGCACTACAACAAAACCTGCTAGTAGGCCTTCCATGAAGGAAGCTGTGCAGATATTGCACCGCTGCGGAGAAGGATTTACTTTTCGAGAGAGGAGCGTTGGGAAATATGATGCTGTTCCCCTTCTTAAGAATTCAAAAAGGCAGCACAGTTTTGATTTTGTTGATAGTGATAGTGGATATTGA 3042 0.3889 MKKSSKSFVKFSSYSLLFFFLILNHAKSYSDMYNEEHIVLMNIKQYLQNPPYLSHWTLSNSYHCSWPELNCTNDSVTGLSLVECNINHTIPTFICDLKNLTHIDFSANSIPGEFPRYLYNCSKLEYLDLSMNNLYGKVPEDIESLSSLQYLNLGSTNFYGDIPVSIGRLKDLRVLQLQYCLFNGTYPDEIGNLSNLETLDLSSNFELPRSSLPSSWTKLSKLKVFYMYGCNLVGEIPETIGEMVALEKLDMSENNLSGQIPKSLLLLKNLTKLYLQHNSLSGEIPDAIEALNLTAIDLTKNNLTGKIPDDFGKLTKLTGLCLSTNKLSGEIPENISRFPYLKDFRVFFNNLSGTLPPDFGRFSKLRSFHICSNKFSGRLPENLCYYGELLNFTAYDNNLSGELPQSLGNCSSLEDFKIYNNQFSGNIPSGLWKSSNLLNFMVSQNKFTGELPDRLSSTISRFEISYNQFSGRIPAGVSSLKNVVVFNASKNFFNGSFPQELATLSTLTTLLLDQNHLTGSIPSDIIAWKSLVTLNLSENQFFGQIPDTIGNLPVLSQLDLSKNQFSGKIPSKLPILTNLNLSSNRLTGRIPSEFGISAFASSFLDNPGLCTDNPALNLTLCNTGPPRRTEGSSWSLPLIVSLIAVFFGLALLASLLIIRLFRKRKQRLDNSWKLISFQRLSFTESNIVSSLTEHNIIGRGGYGTVYRVPVDDLGYVGVKKIWNNRKLDKRLESSFHAEVKILSNIRHNNIVKLLCCISNQDSMLLVYEYHENRSLDRWLCKKSKSSGMSGSVHHVVIDWPKRLKIATGIAQGLCYMHHDCSPPIVHRDVKTSNILLDVQFNAKVADFGLARMLIKPEELETMSNVVGSFGYIAPEYIKTTRVSEKVDVFSFGVILLELTTGKEANYGDEHSSLAEWALRHVQLGTDIEELLDKDVMELSNVDEMCSAFKLGIMCTTTKPASRPSMKEAVQILHRCGEGFTFRERSVGKYDAVPLLKNSKRQHSFDFVDSDSGY* 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g2216 1013 Pfam Protein kinase domain 693 970 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g2216 1013 ProSitePatterns Serine/Threonine protein kinases active-site signature. 824 836 IPR008271 GO:0004672|GO:0006468
Lan6g2216 1013 Gene3D Ribonuclease Inhibitor 186 289 IPR032675 -
Lan6g2216 1013 Gene3D Ribonuclease Inhibitor 33 185 IPR032675 -
Lan6g2216 1013 Gene3D Phosphorylase Kinase; domain 1 672 769 - -
Lan6g2216 1013 Gene3D Transferase(Phosphotransferase) domain 1 771 985 - -
Lan6g2216 1013 SUPERFAMILY RNI-like 292 593 - -
Lan6g2216 1013 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 13 1003 - -
Lan6g2216 1013 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 13 1003 - -
Lan6g2216 1013 SMART LRR_sd22_2 97 129 - -
Lan6g2216 1013 SMART LRR_sd22_2 314 337 - -
Lan6g2216 1013 SMART LRR_sd22_2 267 293 - -
Lan6g2216 1013 Gene3D Ribonuclease Inhibitor 358 624 IPR032675 -
Lan6g2216 1013 Gene3D Ribonuclease Inhibitor 290 357 IPR032675 -
Lan6g2216 1013 SUPERFAMILY Protein kinase-like (PK-like) 684 972 IPR011009 -
Lan6g2216 1013 SMART serkin_6 691 976 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g2216 1013 Pfam Leucine Rich Repeat 269 291 IPR001611 GO:0005515
Lan6g2216 1013 Pfam Leucine Rich Repeat 292 314 IPR001611 GO:0005515
Lan6g2216 1013 SUPERFAMILY L domain-like 34 291 - -
Lan6g2216 1013 SMART LRR_typ_2 267 291 IPR003591 -
Lan6g2216 1013 SMART LRR_typ_2 145 169 IPR003591 -
Lan6g2216 1013 SMART LRR_typ_2 573 597 IPR003591 -
Lan6g2216 1013 SMART LRR_typ_2 97 121 IPR003591 -
Lan6g2216 1013 SMART LRR_typ_2 314 338 IPR003591 -
Lan6g2216 1013 SMART LRR_typ_2 193 214 IPR003591 -
Lan6g2216 1013 SMART LRR_typ_2 504 528 IPR003591 -
Lan6g2216 1013 ProSiteProfiles Protein kinase domain profile. 691 980 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g2216 Lan-Chr6 32482150 32486588 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g2216 36 1013 Receptor kinase-like Gene Family AT5G25930 48.990 0.0 914
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lan6g2216 Pkinase 9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g2216 - - gmx:100798963 1390.94