Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g2214 ATGACAAAGGTTGTTCTATCATGTCTCAAAATGACACTTTTTTATCTTCTCTCCTTCCTCTTCCTCATCTATGCACACTCACAGTCTCAGTCACTGCTCTATGATCAAGAACATGTAGTCCTACTGAGGATAAAACAGTACCTTCAGAACCCTCCATTCCTAAGTCACTGGACTACAACAAACTCTTCACATTGCTATTGGCCAGAGATCAAATGCACCAATGGCTCAGTCACTACACTGGTCATGATCAACACCAACATCACTCAAACATTACCACCTTTTATATGTAACCTCAAAAACCTCACATACATTGATTTTCAGTTCAATTATATTCCTGGTGAGTTCCCTAGATCTCTCTATAACTGTCCCAAGCTTGAGCATCTTGATCTATCACAGAACTACTTTGTTGGTAAGATTCCTGATGATATTGACACATTGGCTAACTTGAGTTTTCTTAGCCTTGGTGGCAATAACTTTTCTGGTGATATTCCAGTGAGTATAGGGAAGTTGAAGAAGCTAACAAATCTTCAACTTTATCAGTGTCCTTTTAATGGTACTATACCTGATGAAATTGGAAACTTGTCCAATCTTGAAACCTTTTATATGTTCTATAATAACATGCTCCCTCCTACAAAGTTGCCATCAAGATTGACCATGTTGAGCAAATTGAAGGTCTTTGATATGCATGACTCCAACTTGGTTGGTGAAATACCTGAAACTATTGGAGAAATGGTGGCATTGGAGAAATTGGATATATCAGGAAATGGTTTAAGTGGACAAATTCCTAATGGTTTGTTGAAGCTAAAGAATCTGAGCATACTTTATCTTTACAAAAATAGCCTATCTGGGGACATACCTGCAGTGGTTGAATCATTCAACTTAATAGAATTGGATCTTTCACAGAATAATCTCACCGGGAAAATACCAGAAGATTTTGGTAAGCTTAAAAAGTTAACAAGTATGAATTTGGAAATGAATCAATTATCAGGTGAAGTACCAGAGAGCATTGGTTTTCTGCCAGATCTGATAGATTTTCTTGTATTTCTCAACAACTTATCAGGTAATCTTCCTCCGAACTTCGGCCGGTTCTCAAAGCTTGAAACATTTCAGGTTGCATCTAATAGTTTCAGTGGAGAGCTTCCACAGAATTTATGCTACAATGGGAGGTTTGTTGGTTTAACTACCTATGACAATAACCTGAGTGGTGAGTTGCCAGAAACACTGGGAAATTGCAGTAGCCTGCAATTTCTGAGTATTGAAAATAATAAGTTTTCTGGCAACATTCCTAGTGGCCTGTGGACATTAAAGAATTTGTCAACAATTAAGGTAAATCAGAACAAGTTCACTGGTGAGCTTCCTGAAAGAATTTCTTTGAGTATTTCCGATTTAGGCATTAGTTACAATCATTTTTCTGGTAGACTTCCAAGTGAAGTGTCTTCATGGAAGAATTTGGTGGTGTTTAGTGCAAGTAACAACTTCTTCAATGGAAGTATTCCACATGATTTAACATCTCTTCCACAGTTAACAACTCTTTTGCTTGATCAGAATCAGCTCACAGGACCACTTCCATCAGATATAATATCATGGAAGTCCTTAACATCTCTAAATGTGAGCCACAACCAACTATCCGGAGAGATACCGGATGCAATTAGTCGGTTACCTGCGCTTAATATATTGGACTTGTCAGAAAACAAAATTTCTGGCCAAATTCCACCTCAACTAGCCCTTATGAGACCAACCAATCTCAATCTATCTTCCAATCAATTAACAGGAAAGATTCCAAGTGATTTTGAAAACCTTGCATATTTCAGGAGCTTTCTGAACAATTCTGGTCTCTGTGCTGATACCACAGTACTGAACCTAACCTTGTGCAGTTCTGCTCCTCAAAGGGTAAGTAATGGTTCATCTGTGTCTCAATCTCATGCCTTGTTAATAACCGTGATGGTATTGGCCTCCTTAGTGGCTCTCTTGTCATCACTCTTTGTCATCAGATTTTACAGAAAAAGAAAGCAAGAGTTGCGTAAGACATGGAAGCTCACTTCCTTCCAGAGGCTGCGTTTCACAAAATCAAGCATTGTGTCATCGATGACCGAACATAATATCATTGGCAGTGGTGGATATGGTGAAGTATACCGTGTTGCTGTCGATGTTTTAGGCAGCTATGTTGCTGTGAAAAAGATATCTCGTAGCAGAAGGTTAGATAAGAAGCTTGAAGATTCATTTCTTGCAGAAGTTGAAATACTCAGCAATATTCGGCACAACAATATTGTCAAGTTGCTATGTTGTATCTCAAGTGAGGATAGTTTGCTCCTAGTTTATGAGTATCATGCAAACCATAGCCTTGATAGGTGGCTGCAAAATAAAAATAAGTCATCATCAGCTGTTTCAGCTTTAGTCCATTATAGTATCCTTGATTGGCCAAGGAGATTGCATATAGCCATTGGAGCTGCCCAAGGTTTGTGCTACATGCACCATGATTGCTCGCCACCGGTTATTCATCGAGATGTGAAAACAAGTAACATTCTGTTGGACTCTGAATTCAATGCAAAAGTTGCTGATTTTGGTCTTGCTAGAATGTTGATCAAGCCAGAAGAACTTGCTACCATGTCAGCTGTGGCTGGCACATTTGGCTATATTGCTCCAGAATATGCTCAAACAACACGAGTGAATGAAAAGATAGATGTATATAGCTTTGGAGTTGTACTACTGGAACTAACAACAGGAAAAGAAGCAAACCATGGAGATGAACACTCATCTCTTGCAGAATGGGCATGGCGCTACATTGAAGTAGAAAGCAACATAGAAGATGTTCTTGATGAAGAAATTAAGGAAGCTTGTTACATTGATGAAATGTGCAGAATCTTCAAACTTGGTGTCATGTGCACTGCAACATTACCAACTAGTAGGCCTTCAATGAAAGAGGTTCTGAAAATATTGCAATGTTGCAATGATCCATTTGCAAATGGTGACAAGAATGTTGGTTTCTATGATCACGTTCCCCTTCTTAAGAGATAA 3015 0.3867 MTKVVLSCLKMTLFYLLSFLFLIYAHSQSQSLLYDQEHVVLLRIKQYLQNPPFLSHWTTTNSSHCYWPEIKCTNGSVTTLVMINTNITQTLPPFICNLKNLTYIDFQFNYIPGEFPRSLYNCPKLEHLDLSQNYFVGKIPDDIDTLANLSFLSLGGNNFSGDIPVSIGKLKKLTNLQLYQCPFNGTIPDEIGNLSNLETFYMFYNNMLPPTKLPSRLTMLSKLKVFDMHDSNLVGEIPETIGEMVALEKLDISGNGLSGQIPNGLLKLKNLSILYLYKNSLSGDIPAVVESFNLIELDLSQNNLTGKIPEDFGKLKKLTSMNLEMNQLSGEVPESIGFLPDLIDFLVFLNNLSGNLPPNFGRFSKLETFQVASNSFSGELPQNLCYNGRFVGLTTYDNNLSGELPETLGNCSSLQFLSIENNKFSGNIPSGLWTLKNLSTIKVNQNKFTGELPERISLSISDLGISYNHFSGRLPSEVSSWKNLVVFSASNNFFNGSIPHDLTSLPQLTTLLLDQNQLTGPLPSDIISWKSLTSLNVSHNQLSGEIPDAISRLPALNILDLSENKISGQIPPQLALMRPTNLNLSSNQLTGKIPSDFENLAYFRSFLNNSGLCADTTVLNLTLCSSAPQRVSNGSSVSQSHALLITVMVLASLVALLSSLFVIRFYRKRKQELRKTWKLTSFQRLRFTKSSIVSSMTEHNIIGSGGYGEVYRVAVDVLGSYVAVKKISRSRRLDKKLEDSFLAEVEILSNIRHNNIVKLLCCISSEDSLLLVYEYHANHSLDRWLQNKNKSSSAVSALVHYSILDWPRRLHIAIGAAQGLCYMHHDCSPPVIHRDVKTSNILLDSEFNAKVADFGLARMLIKPEELATMSAVAGTFGYIAPEYAQTTRVNEKIDVYSFGVVLLELTTGKEANHGDEHSSLAEWAWRYIEVESNIEDVLDEEIKEACYIDEMCRIFKLGVMCTATLPTSRPSMKEVLKILQCCNDPFANGDKNVGFYDHVPLLKR* 1005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g2214 1004 Pfam Leucine Rich Repeat 124 144 IPR001611 GO:0005515
Lan6g2214 1004 Pfam Leucine Rich Repeat 247 268 IPR001611 GO:0005515
Lan6g2214 1004 Pfam Leucine Rich Repeat 582 600 IPR001611 GO:0005515
Lan6g2214 1004 Pfam Leucine Rich Repeat 531 553 IPR001611 GO:0005515
Lan6g2214 1004 Pfam Leucine Rich Repeat 293 315 IPR001611 GO:0005515
Lan6g2214 1004 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 14 1003 - -
Lan6g2214 1004 ProSiteProfiles Protein kinase domain profile. 696 987 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g2214 1004 Gene3D Phosphorylase Kinase; domain 1 678 775 - -
Lan6g2214 1004 Pfam Leucine rich repeat N-terminal domain 39 72 IPR013210 -
Lan6g2214 1004 SUPERFAMILY Protein kinase-like (PK-like) 688 981 IPR011009 -
Lan6g2214 1004 SUPERFAMILY L domain-like 43 387 - -
Lan6g2214 1004 ProSitePatterns Serine/Threonine protein kinases active-site signature. 831 843 IPR008271 GO:0004672|GO:0006468
Lan6g2214 1004 ProSitePatterns Protein kinases ATP-binding region signature. 702 726 IPR017441 GO:0005524
Lan6g2214 1004 Gene3D Ribonuclease Inhibitor 147 209 IPR032675 -
Lan6g2214 1004 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 14 1003 - -
Lan6g2214 1004 SUPERFAMILY RNI-like 291 606 - -
Lan6g2214 1004 SMART serkin_6 696 987 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g2214 1004 Gene3D Ribonuclease Inhibitor 36 146 IPR032675 -
Lan6g2214 1004 Pfam Protein kinase domain 698 977 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g2214 1004 Gene3D Transferase(Phosphotransferase) domain 1 777 992 - -
Lan6g2214 1004 Gene3D Ribonuclease Inhibitor 346 624 IPR032675 -
Lan6g2214 1004 Gene3D Ribonuclease Inhibitor 210 345 IPR032675 -
Lan6g2214 1004 SMART LRR_typ_2 146 170 IPR003591 -
Lan6g2214 1004 SMART LRR_typ_2 315 339 IPR003591 -
Lan6g2214 1004 SMART LRR_typ_2 505 529 IPR003591 -
Lan6g2214 1004 SMART LRR_typ_2 244 268 IPR003591 -
Lan6g2214 1004 SMART LRR_typ_2 553 577 IPR003591 -
Lan6g2214 1004 PRINTS Leucine-rich repeat signature 294 307 - -
Lan6g2214 1004 PRINTS Leucine-rich repeat signature 553 566 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g2214 Lan-Chr6 32471168 32475202 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g2214 37 980 Receptor kinase-like Gene Family AT5G25930 52.110 0.0 967
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lan6g2214 Pkinase 2.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g2214 - - gmx:100785907 1475.3