Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g2211 ATGACAATGGGAAAAGCCACAAGGTGGTTGAAGAACTTGTTTGGCATAAAAAGTGACAAAGAACAACAACACAAACAAAACTCAAATTCTAGAATTTTATGTCACAATCCAGCAACTATACCACCCAACCTTTCTCCAGCTGAAGCAGCTTGGTTACAATCTTTCTATAAAGAAACAGATAAGGAACAGAATAAGCATGCAGTTGCTGTTGCTGCAGCCACCGCAGCCGCGGCTAATGCTGCGGTGGCTGCAGCACAGGCTGCTGTGGCAGTGGTTAGGCTGACCAGCCATGACAGAGGTACCATGTTTAGTGGTGGAGATAAGATGTGTGCTGCTCTTAAGATTCAGACCCTCTTTAGAGGATTCTTGGCGAGGAAGGCACTGAGAGCATTAAAAGGATTGGTGAAGTTACAGGCACTTGTGAGAGGGTATTTAGTGAGGAAGCAAGCAACAGCAACACTGCACAGTATGCAGGCTCTTATTAGAGCTCAAGCTACTGTTCGGTCTCACAAATCTCGCGGCCTCATTAGTACGAAAAATGAAGCATATAGATTCCAAAACCGAGCAAGAAGATCCATGGAGATATTTGATGACAATAGGAGTGAATACATAGCTCCAATCCACAGTAGAAGGCTATCTTCCTCATTTGATACCCCAATTAACTACAACAACAACACCAATAGTGTTGATGGGAGCCCGAAAATTGTGGAAGTTGACACTGGTAATAGCAGGCCTAATTCAAGGTCTAGAAGGACTAACACCTCAATTTCAGATTTTGGAGATGTCCCTTCATTCCAAACACTTTCATCTCCACTTCCAATTCCATATGCTACACCAGCTAGATTATCCATACCAGACCACAGGAACTTCAACGACTCATCGGAGTATGAGTTAACAGAAGAACAATGCAGATTCTCCTCTACAGCACACAGCACTCCAAGGTTCACAAACTCATGTAGTTGTGGTGCACCTTTAACACCAAAGACTGTGGGCACTGATTACTTGTTCCTAAGGGAATATGGGAACTATCCAAATTACATGGCTAGTACTAAGTCTTTCAAGGCCAAATTGAGGTCTCATAGTGCTCCGAAGCAAAGGCCGGAACCTGGTCAAATTCGGAAGAGGATTTCGCTCAATGAGATGATGGAGTCTGGTAATAGTTTGAGTGGGTTTAGAATGCATAGGTCTGGCTCACAGGTTCAAGAAGCTGTTAATTTCAAGAATGCTGTGATGGGTAAGCTTTACAAGTCCACAGAATCTTCTAAGGAGATGGAAAGAAATTACTTCCACAGTAGAAGGTGTTGA 1305 0.4337 MTMGKATRWLKNLFGIKSDKEQQHKQNSNSRILCHNPATIPPNLSPAEAAWLQSFYKETDKEQNKHAVAVAAATAAAANAAVAAAQAAVAVVRLTSHDRGTMFSGGDKMCAALKIQTLFRGFLARKALRALKGLVKLQALVRGYLVRKQATATLHSMQALIRAQATVRSHKSRGLISTKNEAYRFQNRARRSMEIFDDNRSEYIAPIHSRRLSSSFDTPINYNNNTNSVDGSPKIVEVDTGNSRPNSRSRRTNTSISDFGDVPSFQTLSSPLPIPYATPARLSIPDHRNFNDSSEYELTEEQCRFSSTAHSTPRFTNSCSCGAPLTPKTVGTDYLFLREYGNYPNYMASTKSFKAKLRSHSAPKQRPEPGQIRKRISLNEMMESGNSLSGFRMHRSGSQVQEAVNFKNAVMGKLYKSTESSKEMERNYFHSRRC* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g2211 434 Pfam Protein of unknown function (DUF4005) 312 392 IPR025064 -
Lan6g2211 434 ProSiteProfiles IQ motif profile. 111 136 IPR000048 GO:0005515
Lan6g2211 434 ProSiteProfiles IQ motif profile. 132 159 IPR000048 GO:0005515
Lan6g2211 434 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 3 418 - -
Lan6g2211 434 Pfam IQ calmodulin-binding motif 110 129 IPR000048 GO:0005515
Lan6g2211 434 Pfam IQ calmodulin-binding motif 135 149 IPR000048 GO:0005515
Lan6g2211 434 SMART iq_5 107 129 IPR000048 GO:0005515
Lan6g2211 434 SMART iq_5 130 151 IPR000048 GO:0005515
Lan6g2211 434 MobiDBLite consensus disorder prediction 223 262 - -
Lan6g2211 434 Gene3D - 108 149 - -
Lan6g2211 434 PANTHER IQ-DOMAIN 5-RELATED 3 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g2211 Lan-Chr6 32454646 32457149 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g2211 3 393 IQD Protein Family AT3G16490 48.379 1.13e-80 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g2211 - - gmx:100797909 513.457