Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g2210 ATGCATGTATTAACTCTTCCTCTTACTTCAAAAAACTTGTTTTATTCTTATTCTCACACTCACCTATGTCTAAGATCTTCTTCTATGCCCACTTGTAAATTCAGCTATACAACCAATGATTTCAACCCCCTTTTCCTCAATTCACATTCATATAGCTACATCTATAGGAATCATGAGAAGAAGAAGAAGAAAACAAGGAATAGAATGATTGTTGTTAGAGGAAGCTATGGTGAATCTCCTTATGATGTTCTTGGGGTATCTTCATCTGCTACTGTTGATGAAATCAAAAGGGCTTATAGGAAACTTGCTCTTAAGTATCATCCAGATGTTAATAAAGAGGATAAGGCGCAGGAGAAGTTCATGAGGATAAAGCATGCATACAATACATTGCTAAATTCAAGTTCCCGCAGAAAATATGATTCTAGAGATCGTGGGTCTAATTTTTCATCTTATTCTTCTGCAAATACACAAACTGAAGAAGAATTTTACGGATTAGGTGACTTCTTTAAAGATCTTCAAAATGAATTCCGGAACTGGGAAGCCAATGCTGCTTCACAAGGAAAGCCAAAGAGCCTCTGGGAGGAATTGTCGGAAATAGGAGAAGAATTTGTAGAGTTCCTTGAGAAAGAACTGAATATTGATGATCCAGAAGTCAATGCCCGGAACGATGATAAAACACCTCAGGGGTCTGGGAAAGGGACACCCAGCAACAGTACTAAAGGTGAAGCCGACAAGGGAAACAAAAGCATTGACGATAACATTGACGAAATAGAAGCCACTTTGGCTCAGTTAAAAAAGGAATTAGGCTTATAG 813 0.3788 MHVLTLPLTSKNLFYSYSHTHLCLRSSSMPTCKFSYTTNDFNPLFLNSHSYSYIYRNHEKKKKKTRNRMIVVRGSYGESPYDVLGVSSSATVDEIKRAYRKLALKYHPDVNKEDKAQEKFMRIKHAYNTLLNSSSRRKYDSRDRGSNFSSYSSANTQTEEEFYGLGDFFKDLQNEFRNWEANAASQGKPKSLWEELSEIGEEFVEFLEKELNIDDPEVNARNDDKTPQGSGKGTPSNSTKGEADKGNKSIDDNIDEIEATLAQLKKELGL* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g2210 270 SUPERFAMILY Chaperone J-domain 75 139 IPR036869 -
Lan6g2210 270 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 56 268 - -
Lan6g2210 270 ProSiteProfiles dnaJ domain profile. 79 143 IPR001623 -
Lan6g2210 270 PRINTS DnaJ domain signature 81 99 IPR001623 -
Lan6g2210 270 PRINTS DnaJ domain signature 99 114 IPR001623 -
Lan6g2210 270 PRINTS DnaJ domain signature 115 135 IPR001623 -
Lan6g2210 270 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 56 268 - -
Lan6g2210 270 Coils Coil 247 267 - -
Lan6g2210 270 Gene3D DnaJ domain 77 186 IPR036869 -
Lan6g2210 270 SMART dnaj_3 78 135 IPR001623 -
Lan6g2210 270 MobiDBLite consensus disorder prediction 214 254 - -
Lan6g2210 270 Pfam DnaJ domain 80 140 IPR001623 -
Lan6g2210 270 ProSitePatterns Nt-dnaJ domain signature. 120 139 IPR018253 -
Lan6g2210 270 MobiDBLite consensus disorder prediction 223 243 - -
Lan6g2210 270 CDD DnaJ 80 132 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g2210 Lan-Chr6 32449179 32452511 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g2210 81 141 C2H2 Transcription Factor Family AT1G74250 40.299 1.22e-07 50.4