Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g2205 ATGGAGTCTGATGAACTTGATGAACCAATATCAGAAGGTAGAAGCAAAGTTATGATGACAAGATCCTATGAGTGCAACTTCTGCAAGAGAGGTTTCTCTAATGCACAAGCACTAGGAGGACACATGAATATCCATAGAAAACACAAAGCAAAACTCAAACAAACTTCAACCTCATCAAACCAATTCTCTTTGGAGAATAATCCTCAAAAGGTTCCTCCACTTTTACCTTGGAATATGTCCCTAAAAGATGGTGTTACCTCAAGAGATGAAACCCATGTTGTTCAAATAAAACAGCTTCCACTCTTTGATGATTCACAAAAGCCACAATCTGAAGCTCTTAGGGAAATTAATGATGAAAATGAAACTAGGGTTTTGCCATGTAGCCAAGGTTCATCATCATCAGAGTTAGACCTTGAACTAAGACTAGGGCTTGATCATGAGGATTCATCAGCTACAATAATGGGTACCAGAAAATTCTTTTGA 483 0.3789 MESDELDEPISEGRSKVMMTRSYECNFCKRGFSNAQALGGHMNIHRKHKAKLKQTSTSSNQFSLENNPQKVPPLLPWNMSLKDGVTSRDETHVVQIKQLPLFDDSQKPQSEALREINDENETRVLPCSQGSSSSELDLELRLGLDHEDSSATIMGTRKFF* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g2205 160 SUPERFAMILY beta-beta-alpha zinc fingers 21 49 IPR036236 -
Lan6g2205 160 PANTHER TRANSCRIPTIONAL REGULATOR TAC1-LIKE 83 154 - -
Lan6g2205 160 PANTHER TRANSCRIPTIONAL REGULATOR TAC1-LIKE 16 63 - -
Lan6g2205 160 ProSitePatterns Zinc finger C2H2 type domain signature. 25 45 IPR013087 -
Lan6g2205 160 Gene3D Classic Zinc Finger 8 72 - -
Lan6g2205 160 ProSiteProfiles Zinc finger C2H2 type domain profile. 23 50 IPR013087 -
Lan6g2205 160 PANTHER OS07G0101800 PROTEIN 83 154 - -
Lan6g2205 160 PANTHER OS07G0101800 PROTEIN 16 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g2205 Lan-Chr6 32415316 32415885 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g2205 20 145 C2H2 Transcription Factor Family AT3G53820 37.594 1.32e-18 75.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lan6g2205 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g2205 - - lang:109351329 312.383