Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g2200 ATGGCATCGATACCTCTAACGACGTCGTTTCCCCTTCTCCGATTACCCTCCTCCTCTAACCTCATTCCAACTTCATCTCTTCGCTATTCAATTCCCGCCAATTCCAAACATACAAAACGATGTCGTTTCAATTTATCACCAATACTCTCAACTTCACATTACAATCTCAGTAACACCAAACTCAACAGAACATTCTCCACCGTAAAAGCCTCCGCCGCCGGAGCTTCTGTTTCTCCGTCACAATCTCCGTCGCCATCTCCGCCGTGGCAAGGTGCCGCAATTAAACCTCTACTAGCTTCAATAGCAACAGGTGTTATACTCTGGTTTGTTCCTGTTCCCGCTGGTGTGACACGGAACGCGTGGCAGTTACTCGCGATTTTCTTAGGTACGATCGTTGGAATTATCACGCAGCCATTGCCGTTAGGTGCGGTGGCTATACTAGGTCTTGGAGTTTCTGTTCTCACCAAAACACTAACATTCGCTGCGGCGTTTTCGGGATTCAGTGATCCGATCCCGTGGCTAATCGCGCTCGCGTTTTTCTTCGCGAAAGGATTCATCAAAACCGGTCTCGGTAACCGCGTTGCGTATCAATTCGTTTCACTTTTCGGTAGCTCGTCGTTAGGGTTAGGTTACAGTTTGGTTTTCAGCGAGGCGCTATTGGCGCCGGCGATTCCGTCTGTTTCGGCGAGAGCCGGTGGGATTTTTCTCCCGCTGGTGAAGTCTCTGTGCGTTGCGTGTGGTAGCAACGTCGGAGATGGAACGGAGCATCGATTAGGGTCGTGGTTGATGTTGACTTGTTTTCAAACTTCGGTAATTTCGTCGGCGATGTTTCTGACGGCGATGGCGGCGAATCCTCTTTGTGCGACTCTGACTCTGAACTCGATTAATCAGACGATTGGGTGGTTGGATTGGGCGAAAGCGGCGATTGTGCCGGGTTTGGTGTCCTTGGTGGTGGTGCCGTTTATATTGTATTTGATTTACCCGCCAACTTTGAAATCAAGTCCTGATGCGCCTAAACTTGCTAGGGAGAAGTTGCAGAAAATGGGGCCTATGACTACAAATGAGAAGATAATGACTGCAACCTTGTTTCTTACGGTGGGTCTTTGGGTTTTTGGAGGGTTTCTTAATATAGATGCTGTAACTTCTGCAATTCTCGGATTAACTGTACTCCTTGTTACTGGGGTTGTAACATGGAAGGAGTGCTTAGGTGAGGGAGTTGCCTGGGATACTCTCACGTGGTTTGCTGCCCTCATTGCAATGGCTGGGTATTTGAACAAATATGGTCTTATTTCTTGGTTCAGCCAAACTGTAGTCAAGTTTGTTGGCGGATTAGGTCTCTCATGGCAACTATCATTCGGTATTCTAGTTCTTCTCTATTTCTACTCACACTACTTCTTTGCAAGTGGAGCAGCTCATATCGGTGCCATGTTCACCGCTTTCTTGTCTGTTGCTACTGCTCTGGGCACTCCGCCATTTTTTGGTGCTATCGTGCTATCCTTCCTCTCCAACCTCATGGGTGGCCTTACCCATTATGGGATTGGCTCAGCTCCTGTGTTTTATGGTGCCAACTATGTGCCCCTTGCTAAATGGTGGGGCTATGGATTCCTTATAAGTGTTGTTAACATTGTTATCTGGCTTGGAATTGGAGGAATTTGGTGGAAGGCCATTGGCTTGTGGTAA 1680 0.4786 MASIPLTTSFPLLRLPSSSNLIPTSSLRYSIPANSKHTKRCRFNLSPILSTSHYNLSNTKLNRTFSTVKASAAGASVSPSQSPSPSPPWQGAAIKPLLASIATGVILWFVPVPAGVTRNAWQLLAIFLGTIVGIITQPLPLGAVAILGLGVSVLTKTLTFAAAFSGFSDPIPWLIALAFFFAKGFIKTGLGNRVAYQFVSLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLPLVKSLCVACGSNVGDGTEHRLGSWLMLTCFQTSVISSAMFLTAMAANPLCATLTLNSINQTIGWLDWAKAAIVPGLVSLVVVPFILYLIYPPTLKSSPDAPKLAREKLQKMGPMTTNEKIMTATLFLTVGLWVFGGFLNIDAVTSAILGLTVLLVTGVVTWKECLGEGVAWDTLTWFAALIAMAGYLNKYGLISWFSQTVVKFVGGLGLSWQLSFGILVLLYFYSHYFFASGAAHIGAMFTAFLSVATALGTPPFFGAIVLSFLSNLMGGLTHYGIGSAPVFYGANYVPLAKWWGYGFLISVVNIVIWLGIGGIWWKAIGLW* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g2200 559 Pfam Sodium:sulfate symporter transmembrane region 96 559 IPR001898 GO:0016020|GO:0022857|GO:0055085
Lan6g2200 559 TIGRFAM dass: transporter, divalent anion:Na+ symporter (DASS) family 111 553 IPR001898 GO:0016020|GO:0022857|GO:0055085
Lan6g2200 559 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 25 559 IPR030676 -
Lan6g2200 559 CDD ArsB_NhaD_permease 131 553 - -
Lan6g2200 559 PANTHER DICARBOXYLATE TRANSPORTER 1, CHLOROPLASTIC 25 559 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g2200 Lan-Chr6 32381243 32385057 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g2200 1 558 Antiporters AT5G12860 79.929 0.0 852
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g2200 - - vun:114169835 873.618