Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g2199 ATGGCTCCTTCAACTCCAATCGCACCTCTTCCCACTCCTTCAAAAACCAATCCCCACTCTCATTCCCTTCTCCCGCGTAGATCCACGCGCCGCTCCCTCAATCCATTTGCCACGCCGCAAAAGGAGAGTTCCACTGAGGTCGTTGAACCGTGTGGTGTTAACGGTTCGGTTCGACTGTCGTTGTTCGATGTGTTGGTGGAGCAGGAAGGAGGTGAGAAAGCAGTTGATAAATTTGAGTCTGGAGGAGAGAATGGAAAGGGTTCGGTTATTCGATCGGTTGCGAAGAAGAGGAAGCGGGAGGATGCGGGTGATGGTGAAGGAACGGTTGATAGATTTGGATCTGAAATATTGAAACCAAGAAATGGGAAAGGTTTCGATGAGATTTGTTTCGGTACTGTGACGCCTGTTCAATCGGAGAAGAGGAAAAGGAGGAAGAAGGAGGAGGAGGGTGAAGGTAAAAGAACAGTTACTAGAGCTTCGGCTTCACGAAAAGGGAAATTGAATTTGAAATTGGAGAAGAAGGGGGAAAAGAGTAAGCCTAAGAGGCGTGTGTATTACAAGAAGGTGGTTTACGACGGGGGCGAGTTTGGAGTAGGGGATGATGTGTATGTGAAGAGGAAATATGGTTTATCCGACGAGGATGTAGATCCTGTAGTGGAGGAGTGTAGGATTTGCTTTGATTCTGGAAGTGAGGTTATGATTGAATGTGATCATTGCTTAGGAGGGTTTCATTTGACGTGTTTGAAGCCGCCATTGAATGAAGTTCCGGAAGGGGATTGGATGTGTGGGTTTTGTGTGGATCTTAAGATGGGTAAGAAGGTTCAATTTCCACAACCTCCAGAGGGAAAGAAATTAGCTAGGACGATGAGGCAGAAGCTTCTTGCGAGTGATTTGTGGGCTGCTCATATTGTAAGTATATGGAAAGAAGTGGATGGCAACTATCAGTGTCGAGTACGGTGGTATACAATTCCAGAAGAGACTTCTGTTGGGAGGCAACCACATAGCCTGAGCAGGGAGCTATACAGAACAAATGATTTTGCAGACATTGAGATGGAATCTGTCCTTAGACATTGCTTTGTCTTGACCCCCAATGAATATGCAAAGGCTTGCGGTGCAGGCGATGATATTTTCTTGTGTGAATACGAATATGACATCCATTGGCACAGTTTCAAACGCCTTGCTGATATTGAGAATGAAAGAGAGGATGGTCATGAGACTGACAGCGACGAGGATTGGAATCTTTCCAAGGAGTCAGACTCTGATACAGATGAAGATGTTGAATATGACGCGGAGACTATTAAAAATACACAATCCCAGCCACTGACAAGCCATCAATTAGCTGCGAATCTTCACAAGGGAAGGTTCTTTGGGCTTCAGAAGATAGGTACAAAGAGAATTCCACAGCATGTAAGGTCTCACAAACAGACTGATATCGAGAGAGCAAAGGCTACACTGCTGTTGTCATCATTGCCTAAATCTCTACCTTGTAGAAATAAAGAAATGGAGGAGATATCTACATTTATTAGGAGTGCTATAGTTGATGATCAATGTCTTGGGCGTTGCCTCTACATTCATGGTGTTCCAGGAACTGGCAAGACAATGAGTGTACTATCAGTAATGAGAAGTTTGAGGTCAGAAGTTGATGCAGGACACATCAGACCGTACAGTTTTGTGGAGATTAATGGGCTGAAATTGGCATCACCGGAAAATATTTATAGGGTCATATATGAGGCATTAAATGGACACAGGGTCAGTTGGAAGAAGGCTCTCCATTTCCTAAATGAGAGATTTGTAGAAGGGAAGAAAACTGGAGAAGAGGCTGACCGGCCATGTATTTTGCTTATTGATGAACTTGATCTTCTTGTAACCAGAAACCAGTCGGTTCTATACAACATTCTTGACTGGCCTACGAAGCCACATTCCAAACTAATTGTAATAGGGATAGCAAATACTATGGATCTTCCAGAGAAATTACTTCCTCGTATATCAAGCCGAATGGGCATACATAGGCTTTGTTTTGGCCCATATAATTATCAACAACTCCAAGAAATCATTTCCAGTCGCCTCAAAGGAATTGATGTATTTGAAAAGCAAGCTATAGAATTTGCATCAAGAAAGGTTGCAGCAATCTCAGGAGATGCACGTCGTGCTTTAGAGATGTGTAGGCGTGCAGCTGAAATAGTAGATTATCGTATGAAGAAGCTAAATTCAAATCCAGATTCTGTTACCATAGGTAAGGGACTTGTTGGTATGGCAGACGTTGAAGCAGCTATTCAAGAAATGTTCCAAGCACCTCATATTCAAGTGATGAGAAATTGTTCAAAACTTAGCAAAATCTTCCTGACTGCTATGGTGCACGAGCTTTACAAAACAGGAATGGGAGAAACCACTTTCGAAAAGTTGGCAATGACGGTTTCACGTCTCTGTATCAGCAATGGAGAAGAGTTTCCTGGATATGATACTCTCCTCCAAGTTGGCTGTAAGCTAGGCGAATGCAGGGTTATTTTATGCGAGCCGGGTGCGAAGCACAGGTTGCAAAAATTACAGCTTAACTTCCCGAGTGATGATGTAACCTTTGCTCTAAGAGACTGCAAAGATCTACCTTGGTTGTCCAAGTATCTAATGTAG 2628 0.4349 MAPSTPIAPLPTPSKTNPHSHSLLPRRSTRRSLNPFATPQKESSTEVVEPCGVNGSVRLSLFDVLVEQEGGEKAVDKFESGGENGKGSVIRSVAKKRKREDAGDGEGTVDRFGSEILKPRNGKGFDEICFGTVTPVQSEKRKRRKKEEEGEGKRTVTRASASRKGKLNLKLEKKGEKSKPKRRVYYKKVVYDGGEFGVGDDVYVKRKYGLSDEDVDPVVEECRICFDSGSEVMIECDHCLGGFHLTCLKPPLNEVPEGDWMCGFCVDLKMGKKVQFPQPPEGKKLARTMRQKLLASDLWAAHIVSIWKEVDGNYQCRVRWYTIPEETSVGRQPHSLSRELYRTNDFADIEMESVLRHCFVLTPNEYAKACGAGDDIFLCEYEYDIHWHSFKRLADIENEREDGHETDSDEDWNLSKESDSDTDEDVEYDAETIKNTQSQPLTSHQLAANLHKGRFFGLQKIGTKRIPQHVRSHKQTDIERAKATLLLSSLPKSLPCRNKEMEEISTFIRSAIVDDQCLGRCLYIHGVPGTGKTMSVLSVMRSLRSEVDAGHIRPYSFVEINGLKLASPENIYRVIYEALNGHRVSWKKALHFLNERFVEGKKTGEEADRPCILLIDELDLLVTRNQSVLYNILDWPTKPHSKLIVIGIANTMDLPEKLLPRISSRMGIHRLCFGPYNYQQLQEIISSRLKGIDVFEKQAIEFASRKVAAISGDARRALEMCRRAAEIVDYRMKKLNSNPDSVTIGKGLVGMADVEAAIQEMFQAPHIQVMRNCSKLSKIFLTAMVHELYKTGMGETTFEKLAMTVSRLCISNGEEFPGYDTLLQVGCKLGECRVILCEPGAKHRLQKLQLNFPSDDVTFALRDCKDLPWLSKYLM* 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g2199 875 Pfam AAA lid domain 696 729 IPR041083 -
Lan6g2199 875 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 160 870 - -
Lan6g2199 875 SMART PHD_3 221 266 IPR001965 -
Lan6g2199 875 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 215 283 IPR013083 -
Lan6g2199 875 MobiDBLite consensus disorder prediction 73 115 - -
Lan6g2199 875 Gene3D - 671 761 - -
Lan6g2199 875 SMART BAH_4 194 394 IPR001025 GO:0003682
Lan6g2199 875 ProSiteProfiles Zinc finger PHD-type profile. 219 268 IPR019787 -
Lan6g2199 875 Coils Coil 875 875 - -
Lan6g2199 875 MobiDBLite consensus disorder prediction 94 115 - -
Lan6g2199 875 Pfam ATPase family associated with various cellular activities (AAA) 523 668 IPR003959 GO:0005524|GO:0016887
Lan6g2199 875 MobiDBLite consensus disorder prediction 137 158 - -
Lan6g2199 875 ProSiteProfiles BAH domain profile. 266 394 IPR001025 GO:0003682
Lan6g2199 875 MobiDBLite consensus disorder prediction 14 49 - -
Lan6g2199 875 MobiDBLite consensus disorder prediction 401 425 - -
Lan6g2199 875 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 1 160 870 IPR020793 -
Lan6g2199 875 MobiDBLite consensus disorder prediction 401 415 - -
Lan6g2199 875 Pfam BAH domain 303 391 IPR001025 GO:0003682
Lan6g2199 875 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 488 730 IPR027417 -
Lan6g2199 875 Pfam PHD-finger 222 266 IPR019787 -
Lan6g2199 875 SUPERFAMILY FYVE/PHD zinc finger 213 272 IPR011011 -
Lan6g2199 875 MobiDBLite consensus disorder prediction 1 49 - -
Lan6g2199 875 Gene3D - 163 410 IPR043151 -
Lan6g2199 875 SMART AAA_5 518 672 IPR003593 -
Lan6g2199 875 MobiDBLite consensus disorder prediction 136 176 - -
Lan6g2199 875 Gene3D - 474 670 IPR027417 -
Lan6g2199 875 ProSitePatterns Zinc finger PHD-type signature. 222 265 IPR019786 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g2199 183 874 Core DNA Replication Machinery Family AT4G14700 68.803 0.0 985
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Lan6g2199 AAA 1.7e-19 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g2199 K02603 - gmx:100798547 1233.78