Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g2166 ATGGATAAGGACAAATCTTTGGGTCATGGTGGAGGTTTCCTACCTCCAACAGGGCGTTATTCGGGTTATTCACCCACTGGAAATGTGGCATTTAATGTGAAATCTGAGCCAGCATCTTCTTCGTCGTCGTTGTTTCATTCATCGGTTATTCCTGGTACTAGTGCAGATTGTAGTGGATTTAGTCATGATATTAGCAAAATGCCTGATAATCCACCAAGAAAAAGAGGTCATAGACGTGCTCATTCGGAGATTCTCACGTTACCTGATGATATTAGCTTTGAGAGTGACCTTGGTGTAGTTGGAGGTGGTGACGGTCCCTCATTTTCTGATGACACTGAGGAAGACTTACTGTCAATGTACCTTGATATGGATAAGTTCAATTCGTCGTCTGCTACATCAGTGTTTCAATTCGGTGAGCTATCTAATGCTGCAGCTGGATCAGGCTCAGGGCCAACATCAGCACCTGCATCAGGAGCACCCACCTCTTCTGCAGAGAATATAGTTAGTGGTAACAATGAAAGGCCCAGAATTAGACACCAACATAGCCAATCCATGGATGGGTCAACAACCATTAAATCTGAGATGCTAGTATCGGGTTCTTCAGATGACATGTCTTCAATTGATTCCAAAAAAGCAATGTCAGCTGCCAAGCTTGCAGAACTTGCCTTAATTGACCCCAAGCGTGCCAAAAGGATATGGGCAAATAGGCAGTCTGCAGCAAGGTCAAAAGAGAGGAAGATGCGCTACATTGCTGAGCTTGAAAGAAAGGTTCAGACATTACAAACGGAAGCAACATCTATGTCTGCACAATTAACTCTCTTGCAGAGAGATACAAACGGGCTGAATTCTGAGAACAGTGAGCTGAAACTGCGTTTGCAAACCATGGAGCAACAAGTTCGCTTGCAAGATGCTTTAAACGATGCATTAAAAGAGGAAATTCAGCATTTGAAATTACTGACTGGGCAAGCTATGCCACCCAATGGAAGACCTATGATGAACTTTACTTCTTTTGGAGGGGGGCAGCAATTCTATCCGAGTAACAATCATGGCACGCACACTCTTTTAGCTGCACAACAGTTTCAACAGCTCCAAATTCATCCTCAGCAGCAGCAGCATCAATTTCAGCGGCAGCAACAAATGCATCAACAGCAGCAGCAGCAGCAACAAATGCTTCAACAGCAGCAGCAGCAGCAACAGGAACAACAGCAACAGGAACAGGAACAGCAGCATCAACAATCAGGGGACTTGAAAATGAGAGAAGCTACACCACCTCCATGTCCCAGAGATAATACTTCACCACATGCAAATCCTTCAGAGTCCAAGGATTGTTGA 1332 0.4452 MDKDKSLGHGGGFLPPTGRYSGYSPTGNVAFNVKSEPASSSSSLFHSSVIPGTSADCSGFSHDISKMPDNPPRKRGHRRAHSEILTLPDDISFESDLGVVGGGDGPSFSDDTEEDLLSMYLDMDKFNSSSATSVFQFGELSNAAAGSGSGPTSAPASGAPTSSAENIVSGNNERPRIRHQHSQSMDGSTTIKSEMLVSGSSDDMSSIDSKKAMSAAKLAELALIDPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSMSAQLTLLQRDTNGLNSENSELKLRLQTMEQQVRLQDALNDALKEEIQHLKLLTGQAMPPNGRPMMNFTSFGGGQQFYPSNNHGTHTLLAAQQFQQLQIHPQQQQHQFQRQQQMHQQQQQQQQMLQQQQQQQQEQQQQEQEQQHQQSGDLKMREATPPPCPRDNTSPHANPSESKDC* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g2166 443 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 225 288 IPR004827 GO:0003700|GO:0006355
Lan6g2166 443 MobiDBLite consensus disorder prediction 21 45 - -
Lan6g2166 443 Coils Coil 374 411 - -
Lan6g2166 443 Gene3D - 226 300 - -
Lan6g2166 443 MobiDBLite consensus disorder prediction 144 170 - -
Lan6g2166 443 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 7 387 - -
Lan6g2166 443 CDD bZIP_plant_RF2 228 277 IPR044759 GO:0003700|GO:0006355
Lan6g2166 443 MobiDBLite consensus disorder prediction 1 45 - -
Lan6g2166 443 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 7 387 - -
Lan6g2166 443 MobiDBLite consensus disorder prediction 144 188 - -
Lan6g2166 443 Coils Coil 243 270 - -
Lan6g2166 443 Coils Coil 278 312 - -
Lan6g2166 443 SMART brlzneu 223 287 IPR004827 GO:0003700|GO:0006355
Lan6g2166 443 MobiDBLite consensus disorder prediction 392 411 - -
Lan6g2166 443 MobiDBLite consensus disorder prediction 60 80 - -
Lan6g2166 443 MobiDBLite consensus disorder prediction 392 443 - -
Lan6g2166 443 SUPERFAMILY Leucine zipper domain 227 278 IPR046347 GO:0003700|GO:0006355
Lan6g2166 443 Pfam bZIP transcription factor 227 285 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g2166 Lan-Chr6 32088984 32096573 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g2166 19 357 bZIP Transcription Factor Family AT1G06070 69.186 4.11e-152 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lan6g2166 bZIP_1 7.8e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g2166 - - gmx:100786738 562.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g2166 6 32088984 32096573 Lan10g0312 10 2057823 2061248 LSH
Lan6g2166 6 32088984 32096573 Lan3g0249 3 1616618 1620690 LSH
Lan6g2166 6 32088984 32096573 Lan8g1768 8 24338510 24343178 PCT
Lan6g2166 6 32088984 32096573 Lan13g0276 13 1760312 1764738 PCT
Lan8g1768 8 24338510 24343178 Lan6g2166 6 32088984 32096573 PCT
Lan13g0276 13 1760312 1764738 Lan6g2166 6 32088984 32096573 PCT