Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g2165 ATGGAGGGGAATATTCAGCCCAGCAAAACTTTGTGGATAGGTTTCCCGCCTTCTTTCCGGATGGATGAACAAATGCTCCACAACGCACTGATTCTATTTGGAGAGATCAATAGAATTAGGAGCGTTCCATCAAAAAACTGTGCGTTTGTTGAATTCAGAAGCACTGATGAAGCTCGGTGTGCCAAAGAGGGTCTTCAAGGACGGCTATTTAATGATCCTCAAATAACTATCAAGTATTCTAGCAGTGAGCTGGCACCTGGAAAAGATTACTCAGGCTTTTATCCTGGAAGTAAAGGGCCAGGACCTGATGTGCTACTTAATGAGCATCCATTTCGACCACCACAGATGGATTTGTTTGGCCATAATCGTCCTATGGTCCCAAATAATTTCCCTGAACAGTTGCCACCTGGTCGTAATATTGCACCAATGCGACCTTTCGGTCCTCAAGGTCTTGAACCTCCTATGTCTGGACCTGAGTTTCATGAGATGGGAAAAATCCACAATTTTCAGGATGGTAGCTCCAAAAGTCAGATAGTTCCAAACTGGAAAAGACCATTTCCTCCTGCACCAGGAATGCTTTCTTCTCCAGTGCCAGGTACTAGGCCTCCTACCAGGTCCACCTCTGGTGCAAGTGATGCACATGGCATAAACCAATTTCCGAGAGATTCTAAACGCTCAAGGACAGGTGGTGCTTTGCTCGTTCATGATGCCCCATTTCCTTTAAGGAATATGGATGGAGGTGTTATTGATCCAAGCAGTCACCCTGGTCCAGTGGGCATATATGGTGTACCTGATTCAGTCCAACCTGATACGGATCATATATGGCGTGGAATTATTGCAAAAGCAGGAAAACTTGTTTGTCATGCTAGATGTGTGCCTATCGGGACAGGGATAGGGACTGAGCTTCCTCATGTTGTTGACTGCACAGCTAGGACGACATTGGATATGCTCACAAAATACTATGCTGATGCAATTGGTTTTGGTACCATTTTCTTTCTCCCGGATAGTGAGGAGGATTTTGCTTCATACACTGAATTTCTTCGCTACCTCAAATCCCAAAACCGGGCTGGTGTTGCTAAGTGTATTGATAACACCACTTTATTCTTGGTACCTCCGTCTGATTTCCTAACCAAAGTTTTGAAAGTCACAGGACCTGAACGTCTGTACGGTGTGATTCTTAAATTTCCAAGTGATGTGTCAATGCAACAAGCGACATATATGCCTGCACCCTCAACTCAGTACATGCAGCAGATTCCTCCTTCGCAAACTGAGTATGGATTGATGTCTGCAAAGGGGCAGCAGGTTTTGACAATGGATTATAACAGAATGTCGCATGCGGATTCTAAGCTTCCTCCAAAACCATTTCATCCAGACACAAATGGTCCTCCTTCAGTTCATTCTGTTCCTCCTGATTATGCTCCTTCTCACACTGTTTCTGCGTTGCCAGCTGGAGTTACATTGACACCGGAGCTTATTGCAACGTTAACATCTTTACTCCCTGCAGGTACACAATCATCTACAATTGATTGCGCAAAGACAGCAGCAGGCTCCTCGACTGTGCAACCACCATTTCCTCCAGTTGCACCTAATGATGGAAACCTGTCTTATTTGTGGAACCAGGATAATCAAATTGAAAATCCATCTAGTCATCCTTCTCAACAGTTTGGGAGTATGTATAATGTTCCCAGTGCTCAATATCAGCATTATCCATCAGCATATACTCCTGGCCACCCTGCTCAAGTGGTCCCTGGCAACTATTATTTCCAAGACACTACTGCCAGCCTGCAGCAGCAAGGTACTGTTTCATCTGGACCGGTGAATAATTTCATCGTTCCTTCTCAAAGTGGACAGGTAGTTGTACCTCCTCAAGTCAATCAGCAGTATTTGGTTGATGTCTCCTCCAGCACCCAGAGTGGCTATGGAATGGTTCAGGGAATGGATGCCTCTGCATTATATAGTTCTCAGGCTTTTCAGCAACCTTATAATCCAGTTGCCTCATTTAATCAAGTTCCGAATGCTAATCCTTCACAACAACAAACTGTGTTGCCCTATACAGCAGACAACGTGAACTCGGAGCCTCCCAGTCAGCAACTACAATCTGCCAATTTTGAAGTTGGTCAGGGTTCATCAGAAGTGGAGGCTGATAGGAACCAGAGGTATCAGGCAGCGCTACAGTTTGCTTCCAGCCTCCTCCTCCAGATACAGCAAAAGCAAACTGATGGAGGGCATGGCCCAGGAAATCAACAGTGA 2250 0.4524 MEGNIQPSKTLWIGFPPSFRMDEQMLHNALILFGEINRIRSVPSKNCAFVEFRSTDEARCAKEGLQGRLFNDPQITIKYSSSELAPGKDYSGFYPGSKGPGPDVLLNEHPFRPPQMDLFGHNRPMVPNNFPEQLPPGRNIAPMRPFGPQGLEPPMSGPEFHEMGKIHNFQDGSSKSQIVPNWKRPFPPAPGMLSSPVPGTRPPTRSTSGASDAHGINQFPRDSKRSRTGGALLVHDAPFPLRNMDGGVIDPSSHPGPVGIYGVPDSVQPDTDHIWRGIIAKAGKLVCHARCVPIGTGIGTELPHVVDCTARTTLDMLTKYYADAIGFGTIFFLPDSEEDFASYTEFLRYLKSQNRAGVAKCIDNTTLFLVPPSDFLTKVLKVTGPERLYGVILKFPSDVSMQQATYMPAPSTQYMQQIPPSQTEYGLMSAKGQQVLTMDYNRMSHADSKLPPKPFHPDTNGPPSVHSVPPDYAPSHTVSALPAGVTLTPELIATLTSLLPAGTQSSTIDCAKTAAGSSTVQPPFPPVAPNDGNLSYLWNQDNQIENPSSHPSQQFGSMYNVPSAQYQHYPSAYTPGHPAQVVPGNYYFQDTTASLQQQGTVSSGPVNNFIVPSQSGQVVVPPQVNQQYLVDVSSSTQSGYGMVQGMDASALYSSQAFQQPYNPVASFNQVPNANPSQQQTVLPYTADNVNSEPPSQQLQSANFEVGQGSSEVEADRNQRYQAALQFASSLLLQIQQKQTDGGHGPGNQQ* 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g2165 749 MobiDBLite consensus disorder prediction 199 214 - -
Lan6g2165 749 PANTHER FLOWERING TIME CONTROL PROTEIN FPA 5 749 - -
Lan6g2165 749 SMART rrm1_1 10 78 IPR000504 GO:0003723
Lan6g2165 749 PANTHER RNA RECOGNITION MOTIF-CONTAINING 5 749 - -
Lan6g2165 749 SUPERFAMILY RNA-binding domain, RBD 5 82 IPR035979 GO:0003676
Lan6g2165 749 MobiDBLite consensus disorder prediction 455 469 - -
Lan6g2165 749 MobiDBLite consensus disorder prediction 446 473 - -
Lan6g2165 749 Gene3D - 2 87 IPR012677 -
Lan6g2165 749 MobiDBLite consensus disorder prediction 193 228 - -
Lan6g2165 749 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 9 82 IPR000504 GO:0003723
Lan6g2165 749 Pfam SPOC domain 269 386 IPR012921 -
Lan6g2165 749 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 21 75 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g2165 Lan-Chr6 32076897 32086809 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g2165 - - lang:109351287 1523.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g2165 6 32076897 32086809 Lan13g0274 13 1737096 1747839 PCT
Lan13g0274 13 1737096 1747839 Lan6g2165 6 32076897 32086809 PCT