Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lan6g2149 | ATGGAACCTCGTGTTGGGAACAAGTTCCGTCTTGGCCGAAAACTTGGTAGCGGATCATTCGGAGAAATCTATCTCGGTACTAATATTCAGACTAATGAAGATGTTGCGGTTAAGCTTGAAAAGGCTAAAACCAAGCATCCCCAATTGTTGTATGAATCGAAGCTGTATAAGATACTGCAAGGAGGAACTGGGATCCCAAATGTGAGATGGTTTGGTGTTGAAGGAGAATATAATGTCCTTGTAATGGATTTACTCGGCTCTAGTCTTGAGGATTTGTTTAATTTCTGTAGTCGGAAATTATCCCTCAAAACCGTTCTTATGCTTGCAGATCAGATGATTAACCGAGTTGAGTATGTTCATTCCAAATCATATTTACACAGGGACATCAAGCCAGACAACTTCCTCATGGGTTTGGGAAGGCGTGCAAATCAGGTGTATGCCATTGACTTTGGTCTTGCTAAGAAATACAGAGATAACTCTACCCATCTGCATATTCCATACAGAGAGAATAGGAATTTGACAGGAACAGCTAGATATGCTAGCATGAATACTCATCTTGGAATTGAGCAAAGCCGGAGGGACGACTTAGAGTCACTTGGATTCGTTCTTATGTATTTCTTGAGAGGAAGTCTTCCATGGCAGGGTTTGAAAGCGGGAAATAAGAAACAGAAGTATGAGAAAATCAGTGAGAAAAAAGTTTCTACTTCTATTGAGTCTCTCTGCCATGGCTATCCCTCAGAATTTGCTTCATACTTTCATTACTGTCGGTCACTGCGGTTTGATGACAAACCAGATTATGCTTATTTGAAAAGGCTCTTCCGTGACCTTTTCATTCGTGAAGGACTCCAATTTGATTATGTCTTTGATTGGACCATTTTGAAATATCAGCAATCTCAAATTTCTGCTCCTCCAGTACGAGCTATTCAGGGTGCTATTGCTGGACCAAGTTCTGGCATGCCACCACTTGTCAATGCTGATGGACAGACAGGTGGGCAAGATGGTAGGCATACTGGTTGGTCTTCATCAGTTCCTACTCGTCGAAGAAACACTGGACCTATTGCAAATGATGGAATCTTATCTAGACAAAAAGACCCTGTTACAAGTGACACAGCTGGATCCAAAGAAGTCAAGATGTCTGGTTCTAATATCTTCTTGTCAAGTGGATCTGCAAGGCGTGGTGCTGTCTCCAGCAGTCATGATGCCCATGTTGGCAGTGAGACCGAACCCTCTCGTCCTCATGCCATGGATGCAGGTCCAGCAGCACTCCGTAAAATCTCTGGTGCTCAAAGAAGTTCGACTATCACGACATCCGAGCACAACTGGTCATCCTCCGGCAGAAAAACATCAAACCTTAAGGATTATGAAAGGGCACTCAGAGGTATTGAGAGCCTGAATATCAAAGATCAGAGGGTACAGTATTAG | 1422 | 0.4297 | MEPRVGNKFRLGRKLGSGSFGEIYLGTNIQTNEDVAVKLEKAKTKHPQLLYESKLYKILQGGTGIPNVRWFGVEGEYNVLVMDLLGSSLEDLFNFCSRKLSLKTVLMLADQMINRVEYVHSKSYLHRDIKPDNFLMGLGRRANQVYAIDFGLAKKYRDNSTHLHIPYRENRNLTGTARYASMNTHLGIEQSRRDDLESLGFVLMYFLRGSLPWQGLKAGNKKQKYEKISEKKVSTSIESLCHGYPSEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGLQFDYVFDWTILKYQQSQISAPPVRAIQGAIAGPSSGMPPLVNADGQTGGQDGRHTGWSSSVPTRRRNTGPIANDGILSRQKDPVTSDTAGSKEVKMSGSNIFLSSGSARRGAVSSSHDAHVGSETEPSRPHAMDAGPAALRKISGAQRSSTITTSEHNWSSSGRKTSNLKDYERALRGIESLNIKDQRVQY* | 474 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lan6g2149 | 473 | CDD | STKc_CK1_delta_epsilon | 8 | 281 | - | - | |
Lan6g2149 | 473 | MobiDBLite | consensus disorder prediction | 330 | 349 | - | - | |
Lan6g2149 | 473 | PANTHER | CASEIN KINASE-RELATED | 1 | 457 | - | - | |
Lan6g2149 | 473 | ProSitePatterns | Protein kinases ATP-binding region signature. | 15 | 38 | IPR017441 | GO:0005524 | |
Lan6g2149 | 473 | PANTHER | CASEIN KINASE 1-LIKE PROTEIN 2 | 1 | 457 | IPR030509 | GO:0004672|GO:0005524 | |
Lan6g2149 | 473 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 124 | 136 | IPR008271 | GO:0004672|GO:0006468 | |
Lan6g2149 | 473 | MobiDBLite | consensus disorder prediction | 426 | 448 | - | - | |
Lan6g2149 | 473 | MobiDBLite | consensus disorder prediction | 328 | 375 | - | - | |
Lan6g2149 | 473 | ProSiteProfiles | Protein kinase domain profile. | 9 | 278 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lan6g2149 | 473 | MobiDBLite | consensus disorder prediction | 387 | 450 | - | - | |
Lan6g2149 | 473 | SMART | serkin_6 | 9 | 287 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lan6g2149 | 473 | SUPERFAMILY | Protein kinase-like (PK-like) | 5 | 290 | IPR011009 | - | |
Lan6g2149 | 473 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1 | 309 | - | - | |
Lan6g2149 | 473 | Pfam | Protein kinase domain | 10 | 226 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lan6g2149 | 473 | MobiDBLite | consensus disorder prediction | 361 | 375 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lan6g2149 | Lan-Chr6 | 31946262 | 31951698 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lan6g2149 | 7 | 219 | EF-hand Containing Proteins | AT2G17890 | 28.959 | 8.08e-15 | 75.1 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CK1_CK1 | Lan6g2149 | Pkinase | 5.9e-26 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lan6g2149 | K02218 | - | gmx:100778165 | 783.482 |