Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g2144 ATGAAATCTCACTATAACAACACCAAAAAATCACAAGCTTGTGCAGCTTGTAAATACCAACGAAGAAAGTGCCCTTCTAACTGCATTTTTGCACCATACTTTCCTCATGATCGCCAAAAACAATTCTTGAATGCTCATAAATTGTTTGGTGTTGGTAAAATAAACAACTTGATCAAACCTCTTGATGCGGTTCAAAGAGACATAGCCATGAGCACGATTATTTATGAATCGAACATGCGCGCTAATGATCCAGTTGGTGGTTGTGTTGGATGTATACATCGTATCTGTTCCCAGATTGCTCGGTATGAGGCGGAATTACGGATTGTTCTTCAACATCTTGTGTTCTTTAGAGCACAATATCAACCTATAACAGAAAGTGTTCAATATGATCCATATATAGCTGATAACATCATCAATGTGAATGATGATGTTATTCCTTTTCACGAAAGTGATATTCATTTTCAAGAACAATTGAAATTGTTGTCCCGAGAAAATGCTATCAAGGATGGAATAGCGGTAGAGAATGTTAACGCCTGTGATGTACAAAACTCAAACTCAGGTTTGTACTTAGAAATCCTTTAA 582 0.366 MKSHYNNTKKSQACAACKYQRRKCPSNCIFAPYFPHDRQKQFLNAHKLFGVGKINNLIKPLDAVQRDIAMSTIIYESNMRANDPVGGCVGCIHRICSQIARYEAELRIVLQHLVFFRAQYQPITESVQYDPYIADNIINVNDDVIPFHESDIHFQEQLKLLSRENAIKDGIAVENVNACDVQNSNSGLYLEIL* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g2144 193 ProSiteProfiles LOB domain profile. 12 113 IPR004883 -
Lan6g2144 193 PANTHER LOB DOMAIN-CONTAINING PROTEIN 22 9 146 - -
Lan6g2144 193 Pfam Lateral organ boundaries (LOB) domain 13 108 IPR004883 -
Lan6g2144 193 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 9 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g2144 Lan-Chr6 31889667 31890248 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g2144 12 117 AS2 family AT3G13850 60.377 8.22e-42 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lan6g2144 LOB 2.9e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g2144 - - lang:109350618 399.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g2144 6 31889667 31890248 Lan5g0625 5 12871775 12873551 PCT
Lan6g2144 6 31889667 31890248 Lan2g0400 2 4054616 4056480 PCT
Lan5g0625 5 12871775 12873551 Lan6g2144 6 31889667 31890248 PCT
Lan2g0400 2 4054616 4056480 Lan6g2144 6 31889667 31890248 PCT