Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g2143 ATGGCAACCAAACATGAAGAAGAATTAGCCAAAAGGGTGCAATACCCACTTGACTCTTCCTCCTACAAAATCCTTGATGAGATTGGTGCTGGTGTAAGTGCCATTGTTTACAAAGCAATCTGTGTGCCCATGAACTCATTAGTAGCCATAAAATCCATAGACCTTGATCGTTCACGCCCTGACTGTGATGATGTTCGACGTGAAGCCAAGACTTTGTCACTTCTTTATCACCATAATATTCTCAATGCTCATTGTTGTTTCACTGTGGATCAACGTTTGTGGGTAGTGATGCCATTTATGGCTGGTGGGTCATTGCAATCTATCATTTCTCATTCTTTCTCTGATGGCTTAACTGAACCATGCATAGCTGTGGTTCTCAAAGAGACTCTTAATGCTCTTTCTTATCTTCATGGTCAAGGTCATCTTCACAGAGATATAAAAGCTGGTAACATACTTGTTGATTCAAATGGTTCAGTGAAGCTTGCAGATTTTGGTGTTTCTGCATCCATTTACGAGTACCCGAATTCGTCATCATCAACTGCAGCACCATGTTTGTCATCCTCTTCATCTCTTAGGCTAACTGATGTTGCTGGCACACCATATTGGATGGCTCCAGAGGTGATTCATTCTCACATAGGCTACAGTTTCAAGGCTGATATATGGTCTTTTGGTATAACAGCTTTAGAGTTAGCACATGGAAGACCTCCACTCTCTCATCTTCCACCTTCTAAGTCTATGATACTTAAGATCACAAAGCGGTTTCGGTTTTCGGATCTCGACAAATATAGGAAAGGTCATGGTGGCAATAAGTTCTCAAAGGCCTTTAAGGATATGGTAGCTTCTTGCCTCCATCAAGACCCATCAAAGAGACCTACAGCTGAGAAATTGCTCAAACATCCCTTCTTCAAGTACTGCAAGGGATCAGAGTTTTTAGTGAAGAATGTGCTGCAAGGATTGCCTAGTGTTGAGAAAAGGTATAAAGAAAGCAAGACTCAGCCTACAACGGCGAACGATGATGATGACGAAGATGAAGGTGACCTGATGAAGGAACAATATGTGAAACAGAGAAGGATCAGTGGTTGGAACTTCAATGAAGATGGATTGGAACTTGACCCTGTATTCCCAAGTGATCATCAGTCCAGGGAGAATGTTACAATAGTTAAAGAAGTTCGGTTCGAGGGCGAAACTGTTATCCAAGACATGCAGCATGGTGAGTTAGAAGAGAATGTTGATACTTCATCAAACATGAGCAAACAAAACACAAATGCTACTTCTAATGTGACTATAGTTGAGAACTTAATGGTGAGTTCTATTCATGGATCATCAAGGGTAGTAGAATCAATTGGTAGTGATCAAGGTGGAGGAATCTTGAACAACAAGGAAGCTATGTTGACAACACTAAATGTGTTAAAAGGGAGTTTGGAACAAGAACTAGGACAAGTTAAGGTTATGATGAATCTCTTACAAGGAGAGGAGATTCAAGTTGTTGATAACCAAGAGCATATGATACAAGAGATTTCTAAGCTGAGGATTGAATTGGAAAATGAAAGGAAGAAGAATTCAGAGTTGGTGTTGCAGGTTGAAATATTCAAGCTTCATTCTTCTGCTGGTGTTAATTAA 1620 0.4037 MATKHEEELAKRVQYPLDSSSYKILDEIGAGVSAIVYKAICVPMNSLVAIKSIDLDRSRPDCDDVRREAKTLSLLYHHNILNAHCCFTVDQRLWVVMPFMAGGSLQSIISHSFSDGLTEPCIAVVLKETLNALSYLHGQGHLHRDIKAGNILVDSNGSVKLADFGVSASIYEYPNSSSSTAAPCLSSSSSLRLTDVAGTPYWMAPEVIHSHIGYSFKADIWSFGITALELAHGRPPLSHLPPSKSMILKITKRFRFSDLDKYRKGHGGNKFSKAFKDMVASCLHQDPSKRPTAEKLLKHPFFKYCKGSEFLVKNVLQGLPSVEKRYKESKTQPTTANDDDDEDEGDLMKEQYVKQRRISGWNFNEDGLELDPVFPSDHQSRENVTIVKEVRFEGETVIQDMQHGELEENVDTSSNMSKQNTNATSNVTIVENLMVSSIHGSSRVVESIGSDQGGGILNNKEAMLTTLNVLKGSLEQELGQVKVMMNLLQGEEIQVVDNQEHMIQEISKLRIELENERKKNSELVLQVEIFKLHSSAGVN* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g2143 539 SUPERFAMILY Protein kinase-like (PK-like) 20 303 IPR011009 -
Lan6g2143 539 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 3 529 - -
Lan6g2143 539 Gene3D Phosphorylase Kinase; domain 1 10 99 - -
Lan6g2143 539 Gene3D Transferase(Phosphotransferase) domain 1 103 353 - -
Lan6g2143 539 Coils Coil 496 526 - -
Lan6g2143 539 MobiDBLite consensus disorder prediction 324 346 - -
Lan6g2143 539 Pfam Protein kinase domain 22 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g2143 539 ProSiteProfiles Protein kinase domain profile. 22 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g2143 539 PANTHER SERINE/THREONINE-PROTEIN KINASE BLUS1 3 529 - -
Lan6g2143 539 SMART serkin_6 22 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g2143 539 ProSitePatterns Protein kinases ATP-binding region signature. 28 51 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g2143 Lan-Chr6 31885262 31888093 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g2143 12 520 MAP Kinase Kinase Kinase Kinase AT4G14480 54.086 4.72e-175 501
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Lan6g2143 Pkinase 7.9e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g2143 K08835 - gmx:100820227 657.521