Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g2132 ATGGACACAAATGTTGACCCACTTCAAAACCCAGCCAAAAGGCACAAATGCTGTGCATGCTACAAGCAATATAAGAAAAAGGAGCATCTTATAGAGCACATGAAAATCTCATACCATTCGATACATCAGCCTAGATGCCCAATCTGTCTTAAGCACTGCAAGTTTCTTGAGTCTATCAGAGAACATATTTTGGGTCCATCTTGTTCAGATATCTTCTCCGAACAAGGTTGTCAACTTTGCTTGAAAATATTTGGTAGCTCCGGGTCTCGCAATGAGCATATGGAATTTTGTCGGCTGCCTGCTCCCATTCCCCTGGGAACAACCGCGTCGCCCACAATAGTACCCGATTTTGATTGTCAAGATTCTTGTGATGAGAACCATGTTGGCATGCGCCCTAGAGCAATTGCAATTGACTGTGAAATGGTTGGTGGAGGAAGTGATGGGTCGCTTGAACTCTGTGCTAGAGTATGCTTGGTAGATGAAGACGAAAAAGTGATCTTCCACACCTATGTGCAGCCTCAAATGCCTGTTACTAATTATAGATATGAGATAACTGGGCTGACAGAAGAGCATCTCAGAGATGCCATGCCACTCAAGCAAGTTCAACAAAAGATATTGCAAATTCTACACAATGGAGAATCCATCGGCAAAGTTAGATTGGAATCGTCGGATGGTGGAAAGGCCAGACTTCTTGTGGGGCATGGCTTAGCTCATGATTTAGATTGTTTGAAATTGAGTTATCCCAATCACTTACTGAGGGACACTTCATTGTATCCTCCATTGTTGAAAACAAACTCAGTCAGCCAGTCACTCAAGTATCTCACCCGAACATATTTAGGTTATGATATCCAAACTGGCACTCATGACCCATATGAAGACTGTGTTTCTGTAATGAGACTGTACAAGAGAATACGAGGACAAGTTCATCAGGACGAAGGCAACAGAACATCGACTTCGACCGCAAGTAACAACATCATTCCCGAGTCTGATCCCTGGGGGTCGAAGGAAGTTGACAATCTCACACCAGATGAACTATATGCCATGTCAAATTCAAACTTCAAGTGTTGGTGTTTGGATTTGAAGCCAAGATCATCTTGA 1098 0.4308 MDTNVDPLQNPAKRHKCCACYKQYKKKEHLIEHMKISYHSIHQPRCPICLKHCKFLESIREHILGPSCSDIFSEQGCQLCLKIFGSSGSRNEHMEFCRLPAPIPLGTTASPTIVPDFDCQDSCDENHVGMRPRAIAIDCEMVGGGSDGSLELCARVCLVDEDEKVIFHTYVQPQMPVTNYRYEITGLTEEHLRDAMPLKQVQQKILQILHNGESIGKVRLESSDGGKARLLVGHGLAHDLDCLKLSYPNHLLRDTSLYPPLLKTNSVSQSLKYLTRTYLGYDIQTGTHDPYEDCVSVMRLYKRIRGQVHQDEGNRTSTSTASNNIIPESDPWGSKEVDNLTPDELYAMSNSNFKCWCLDLKPRSS* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g2132 365 Gene3D - 130 323 IPR036397 GO:0003676
Lan6g2132 365 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 12 362 - -
Lan6g2132 365 MobiDBLite consensus disorder prediction 308 333 - -
Lan6g2132 365 CDD REX4_like 135 302 IPR037431 GO:0006364|GO:0008408
Lan6g2132 365 PANTHER EXONUCLEASE FAMILY PROTEIN 12 362 - -
Lan6g2132 365 SMART exoiiiendus 133 310 IPR013520 -
Lan6g2132 365 ProSitePatterns Zinc finger C2H2 type domain signature. 17 39 IPR013087 -
Lan6g2132 365 SUPERFAMILY Ribonuclease H-like 134 304 IPR012337 -
Lan6g2132 365 Pfam Exonuclease 135 301 IPR013520 -
Lan6g2132 365 MobiDBLite consensus disorder prediction 311 329 - -
Lan6g2132 365 ProSiteProfiles Zinc finger C2H2 type domain profile. 15 44 IPR013087 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g2132 14 359 C2H2 Transcription Factor Family AT3G27970 51.841 2.07e-128 370