Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g2131 ATGAGTCGAGAACAACAGAAACGAGGGAAGCAAGAAAAAGGCTCAAATGGTGCTGAGAAGGTCATTGTTGCAGTCAAGGCATCAAAGGAAGTTCCAAAGACTGCTCTTGTTTGGTCTTTAACTCATGTTGTTCAACCTGGTGATTGCATTACACTGCTAGTGGTTGTGCCTTCACAGAGTTCAGGCCGAAGATTATGGGGTTTTCCTAGGTTTGCTGGTGACTGTGCTAGTGGTCACAAGAAATCTCATACTACAGGAACAAGTTCAGAACAGAAGACTGATATCACTGATTCTTTCTCTCAGATGATCCTTCAGCTCCACGATGTCTATGATCCTAATAAGATAAATGTCAAGATTAAAATTGTTTCCGGGTCTCCGTGTGGAGCAGTGGCTGCAGAAGCTAAGAAAATCCAAGCCAATTGGGTTGTTTTAGACAAACACCTCAAACACGAGGAAAAGTGGTGCATGGAAGAGCTGCAGTGCAACATCGTTGTTATGAAGCGTTCCCAACCGATAGTGCTTCGCTTGAATTTGGTTGGATCCCTAAAGAAGGATATTGAAGAAGCAGGTCCATTACCTTCTGAGCAAGATGAGATGGCTGCAAAACAAACCAAGAAGAAGAACAATTCTTTAAATTCGATAAAAGGACCAGTTGCCACTCCAACTAGCAGCCCCGAGCTAGGGACATCGTTTACTACAACTGAAGTTGGTACTTCATCAGTCTCAAGCTCCGATCTAGGAACTTCACCATTCTTCATATCTGAGATGAATTGCGAGTCAAAGAAAGAGGAAACTATCGAAGAAAATCAAGAACTCGATGATACTAATTCAGATACAGACAATGAGACTTTGTCCACATCTTCAGCAAGCTTGAGATTCCAGCCATGGATAGCTGATTTACTTTTACATCAACAATCTTCCCAATGCATAGCAGAAAGATCAGAGAGATCTCGTAATACGCCTCAATCATCTACAACCAGAGCTTTGCTTGAAAAGTTTTCAAGGCTCAATAGAGAAGCTGAACTTGAAATCTCAACCTATAGGACTACTGAATTGGATTTTAGCGGAAATGTAAGAGAAGCAGTAGCATTATCTAGAAATGCTCCACCCGGTCCACCTCCATTATGTTCAATATGTCAACACAAGGCTCCCGTTTTCGGAAAACCTCCAAGATTGTTCAGCTACACTGAGTTGGAGCTTGCTACTGGTGGATTTTCACAAGCTAATTTCTTGGCAGAAGGAGGGTTTGGATCTGTTCACAGAGGTGTTCTTCCAGACGGACAAGTCATTGCTGTCAAGCAACATAAATTGGCTAGTTCTCAGGGTGATGTTGAATTTTGCTCAGAGGTAGAAGTCCTGAGCTGTGCTCAGCACCGAAATGTTGTTTTGCTGATTGGATTCTGTATAGAGGATAAGCGAAGGCTTCTAGTTTACGAGTACATCTGCAACGGATCTTTGGATACTCATTTGTATGGGAGGCAACGAGAATCATTAGAATGGTCTGCACGGCAAAAAATTGCTGTTGGAGCTGCTCGAGGGTTGCGGTATCTACATGAAGAGTGCAGAGTGGGTTGCATTATTCACCGTGATATGCGGCCAAACAACATTCTTATCACTCATGATTTCGAGCCACTGGTTGGTGATTTTGGACTGGCAAGGTGGCAGCCTGATGGAGACACAGGTGTGGATACTAGAGTAATTGGAACTTTCGGGTATTTGGCTCCTGAATATGCTCAAAGCGGTCAAATAACTGAAAAGGCTGATGTTTATTCATTTGGAGTGGTATTAGTGGAGCTTGTCACCGGGCGAAAAGCCGTCGATCTCAATCGGCCCAAGGGACAACAGTGTCTTACTGAGTGGGCGCGACCATTGTTAGAAGAATATGCCATTGAGGAACTGATTGACCCAAGTTTGGGAAGTCACTATTCAGAACATGAGGTCTATTGCATGCTACATGCTGCATCATTGTGCATAAGGAGAGATCCTTGTTCTAGACCACGCATGTCACAGGTTCTCCGAATACTGGAGGGTGACGTGGTGATGGACCCAAATTACATTTCAAGTCCAGGTTATGATGCTGGAAACCGGAATCGTTGA 2097 0.4368 MSREQQKRGKQEKGSNGAEKVIVAVKASKEVPKTALVWSLTHVVQPGDCITLLVVVPSQSSGRRLWGFPRFAGDCASGHKKSHTTGTSSEQKTDITDSFSQMILQLHDVYDPNKINVKIKIVSGSPCGAVAAEAKKIQANWVVLDKHLKHEEKWCMEELQCNIVVMKRSQPIVLRLNLVGSLKKDIEEAGPLPSEQDEMAAKQTKKKNNSLNSIKGPVATPTSSPELGTSFTTTEVGTSSVSSSDLGTSPFFISEMNCESKKEETIEENQELDDTNSDTDNETLSTSSASLRFQPWIADLLLHQQSSQCIAERSERSRNTPQSSTTRALLEKFSRLNREAELEISTYRTTELDFSGNVREAVALSRNAPPGPPPLCSICQHKAPVFGKPPRLFSYTELELATGGFSQANFLAEGGFGSVHRGVLPDGQVIAVKQHKLASSQGDVEFCSEVEVLSCAQHRNVVLLIGFCIEDKRRLLVYEYICNGSLDTHLYGRQRESLEWSARQKIAVGAARGLRYLHEECRVGCIIHRDMRPNNILITHDFEPLVGDFGLARWQPDGDTGVDTRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLNRPKGQQCLTEWARPLLEEYAIEELIDPSLGSHYSEHEVYCMLHAASLCIRRDPCSRPRMSQVLRILEGDVVMDPNYISSPGYDAGNRNR* 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g2131 698 Coils Coil 262 282 - -
Lan6g2131 698 MobiDBLite consensus disorder prediction 205 255 - -
Lan6g2131 698 PANTHER OS01G0253100 PROTEIN 16 694 IPR045271 GO:0004714|GO:0006468
Lan6g2131 698 ProSitePatterns Tyrosine protein kinases specific active-site signature. 526 538 IPR008266 GO:0004672|GO:0006468
Lan6g2131 698 PANTHER KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN 16 694 - -
Lan6g2131 698 Gene3D Transferase(Phosphotransferase) domain 1 481 684 - -
Lan6g2131 698 CDD STKc_IRAK 411 677 - -
Lan6g2131 698 MobiDBLite consensus disorder prediction 189 287 - -
Lan6g2131 698 Pfam Protein tyrosine and serine/threonine kinase 409 674 IPR001245 GO:0004672|GO:0006468
Lan6g2131 698 Gene3D Phosphorylase Kinase; domain 1 377 480 - -
Lan6g2131 698 CDD USP_Like 20 147 - -
Lan6g2131 698 SUPERFAMILY Protein kinase-like (PK-like) 389 681 IPR011009 -
Lan6g2131 698 ProSiteProfiles Protein kinase domain profile. 405 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g2131 698 Gene3D HUPs 4 166 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g2131 Lan-Chr6 31801181 31807121 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g2131 385 697 Trihelix Transcription Factor Family AT1G70460 51.084 3.77e-102 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Lan6g2131 PK_Tyr_Ser-Thr 1.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g2131 - - gmx:100789216 1222.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g2131 6 31801181 31807121 Lan5g0615 5 12557335 12562711 PCT
Lan6g2131 6 31801181 31807121 Lan9g0641 9 9436100 9441631 PCT
Lan5g0615 5 12557335 12562711 Lan6g2131 6 31801181 31807121 PCT
Lan9g0641 9 9436100 9441631 Lan6g2131 6 31801181 31807121 PCT