Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g2121 ATGTTGTTCCAAATTTGCATGGATGGTCACCTCTCCTCTAATATCGACGGCAACAGCCTCACCGCCGCCGCCTTCATTGGCCATGATGGCTCCGCCTGGGGTGAGAGCTCCAAATTCCCTAAGTTTAAGGCCGAAGAAATTGAAGCCATCATGAAAGGTTTTGATGAACCTAACATCCTTGCAACAAATGGGTTGTACCTTGGTGGCACAAAGTACAATGTCATCCAAGGAGAAAATGGAGCTGTTATCAATGCCAAGCAGGGTAGGAGTGGGATCAGTGTGAAGAAAACAAATAAAGCTGTTGTGATTGGTATCTTTGAGGAACCTATGGCCCCAGAAGAGTGTTCCAAGATTGTTGATAAATTGGGAGATTATTTGATTGACCAAGGCTTCTAG 396 0.452 MLFQICMDGHLSSNIDGNSLTAAAFIGHDGSAWGESSKFPKFKAEEIEAIMKGFDEPNILATNGLYLGGTKYNVIQGENGAVINAKQGRSGISVKKTNKAVVIGIFEEPMAPEECSKIVDKLGDYLIDQGF* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g2121 131 SMART prof_2 8 131 IPR005455 GO:0003779
Lan6g2121 131 CDD PROF 15 131 IPR005455 GO:0003779
Lan6g2121 131 SUPERFAMILY Profilin (actin-binding protein) 7 131 IPR036140 -
Lan6g2121 131 PRINTS Profilin signature 21 30 IPR005455 GO:0003779
Lan6g2121 131 PRINTS Profilin signature 40 60 IPR005455 GO:0003779
Lan6g2121 131 PRINTS Profilin signature 64 78 IPR005455 GO:0003779
Lan6g2121 131 PRINTS Profilin signature 100 113 IPR005455 GO:0003779
Lan6g2121 131 PRINTS Profilin signature 113 130 IPR005455 GO:0003779
Lan6g2121 131 PANTHER PROFILIN 1 131 IPR005455 GO:0003779
Lan6g2121 131 Gene3D Dynein light chain 2a, cytoplasmic 2 131 - -
Lan6g2121 131 PRINTS Plant profilin signature 1 11 IPR005455 GO:0003779
Lan6g2121 131 PRINTS Plant profilin signature 27 40 IPR005455 GO:0003779
Lan6g2121 131 PRINTS Plant profilin signature 52 66 IPR005455 GO:0003779
Lan6g2121 131 PRINTS Plant profilin signature 71 80 IPR005455 GO:0003779
Lan6g2121 131 PRINTS Plant profilin signature 84 99 IPR005455 GO:0003779
Lan6g2121 131 PRINTS Plant profilin signature 104 117 IPR005455 GO:0003779
Lan6g2121 131 PRINTS Plant profilin signature 117 130 IPR005455 GO:0003779
Lan6g2121 131 Pfam Profilin 16 131 IPR005455 GO:0003779
Lan6g2121 131 PANTHER PROFILIN 1 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g2121 Lan-Chr6 31722548 31724303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g2121 1 128 Cytoskeleton Gene Families AT2G19760 53.125 9.48e-49 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g2121 K05759 - fve:101294035 173.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g2121 6 31722548 31724303 Lan3g0209 3 1349499 1350435 LSH