Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g2113 ATGGCATCATCCCTTTTGAGAATCATGTGTACTTGTGTGATCATTTTGTTGGGTTCTATGGATACTTTTGTTGTTGAAGGTGGAAGAAGATTCAAAGTTGGTGATGACTTAGGTTGGCATGAACCTGTCCCCAACAATACTGTTTTTTACATCCGTTGGGCTGAAAGGAACAGATTCCAAGTTGGAGATTCTCTCATTTTTGTGTACCAGAATGATTCAGTTCTTACTGTGGACAAAAAAGACTACTTTACTTGTGACACAAGCAACCCCATCACTGCCTTTGACAATGGGGAGAGCATTTTGAATCTTGACATGCCTGGACCCTTCTACTTCATCAGTGGAACTGAAAATCACTGCACCAATGGACAAAAGTTACTTGTGGAAGTTATGTCACCACATCCAAAATCTTCACCTCCATCTTATGCTTCTGATGATAGCTTTGAAGATTCAATCTCAGCCTCAGCCTCTGTGGTGCTTGGTCCTGTCCCTATGGCTTCCATTGTCACATTTGTAATTGTGCTTCACACCCTTTGA 534 0.4157 MASSLLRIMCTCVIILLGSMDTFVVEGGRRFKVGDDLGWHEPVPNNTVFYIRWAERNRFQVGDSLIFVYQNDSVLTVDKKDYFTCDTSNPITAFDNGESILNLDMPGPFYFISGTENHCTNGQKLLVEVMSPHPKSSPPSYASDDSFEDSISASASVVLGPVPMASIVTFVIVLHTL* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g2113 177 PANTHER BLUE COPPER PROTEIN 20 168 IPR039391 GO:0009055
Lan6g2113 177 SUPERFAMILY Cupredoxins 29 130 IPR008972 -
Lan6g2113 177 ProSiteProfiles Phytocyanin domain profile. 29 131 IPR003245 GO:0009055
Lan6g2113 177 Gene3D - 29 140 IPR008972 -
Lan6g2113 177 CDD OsENODL1_like 29 130 IPR041846 -
Lan6g2113 177 Pfam Plastocyanin-like domain 46 123 IPR003245 GO:0009055
Lan6g2113 177 PANTHER EARLY NODULIN-LIKE PROTEIN 2 20 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g2113 Lan-Chr6 31653272 31654318 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g2113 4 140 Phytocyanin Superfamily AT1G79800 49.296 5.37e-46 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g2113 - - gmx:102664880 189.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g2113 6 31653272 31654318 Lan10g0262 10 1652588 1653758 LSH
Lan6g2113 6 31653272 31654318 Lan3g0200 3 1266174 1267285 LSH