Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g2110 ATGACACAAAGAACCACTTCTCAAACTTCTACCAACAACAAAACAGAGTCTAAAAAACAGAGCAAAAACAGAGCATTGAAACCCATAAAGTTTAGTAAGCATCCTATTTACCATGGTGTTCGAATGCGTAATTGGGGCAAATGGGTATCTGAAATTCGTGAGCCTCGCAAGAAATCTCGCATCTGGCTCGGAACTTTCGATACACCTGAAATGGCAGCAAGAGCACACGATGTTGCAGCTATGAGCATTAAGGGTAACTCAGCTATTCTAAACTTTCCAAATATAGCTCACGTGCTTCCAAAACCACTCACGTGTACTCCACGTGATATTCAAGCTGCGGCTGCAGAAGCTGCAGCTATGGTTAAGTTTGACATAGAAAAATGGTTAGAGACAGAGTCCTCAGAACTGAGTGAGATTGTTGAACTTCCAAATTTAGAAGAAGAAAGCTCTGACTCGGTGGAATCAAGAACTGAGTTGATGTTTATAGACTCGGTGGATAGTTGGGTGTACCCAACAATGGGGGATTATGGAATAGAATTCATGCATGAAGGAGAAAGTTTCTTGTTATAG 570 0.414 MTQRTTSQTSTNNKTESKKQSKNRALKPIKFSKHPIYHGVRMRNWGKWVSEIREPRKKSRIWLGTFDTPEMAARAHDVAAMSIKGNSAILNFPNIAHVLPKPLTCTPRDIQAAAAEAAAMVKFDIEKWLETESSELSEIVELPNLEEESSDSVESRTELMFIDSVDSWVYPTMGDYGIEFMHEGESFLL* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g2110 189 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 6 186 - -
Lan6g2110 189 MobiDBLite consensus disorder prediction 1 16 - -
Lan6g2110 189 PRINTS Ethylene responsive element binding protein signature 37 48 IPR001471 GO:0003700|GO:0006355
Lan6g2110 189 PRINTS Ethylene responsive element binding protein signature 59 75 IPR001471 GO:0003700|GO:0006355
Lan6g2110 189 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 6 186 - -
Lan6g2110 189 MobiDBLite consensus disorder prediction 1 27 - -
Lan6g2110 189 Gene3D AP2/ERF domain 36 95 IPR036955 GO:0003700|GO:0006355
Lan6g2110 189 SUPERFAMILY DNA-binding domain 36 93 IPR016177 GO:0003677
Lan6g2110 189 SMART rav1_2 36 99 IPR001471 GO:0003700|GO:0006355
Lan6g2110 189 ProSiteProfiles AP2/ERF domain profile. 36 93 IPR001471 GO:0003700|GO:0006355
Lan6g2110 189 CDD AP2 35 94 IPR001471 GO:0003700|GO:0006355
Lan6g2110 189 Pfam AP2 domain 35 85 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g2110 Lan-Chr6 31633094 31634005 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g2110 2 171 AP2-EREBP Transcription Factor Family AT5G11590 48.000 8.53e-55 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Lan6g2110 AP2 6.8e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g2110 K09286 - gmx:100787471 227.639