Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g2102 ATGATGGCTGAGAACCCTAACTGGTGGAGCATGCATCCAGCTTCTTTGATCCCTCCACAATATGTGCTTGGATCTTCTTCAATTCCTTTCAATTCTTTGGCAGAAAACCAAGAGCCTCCTCAATCATGGAGCCAACTGCTTTTCACTGGATTACATGGGGAAGATGAAAGTATGGGTCTGAGTCATTTTCAATCTAAAAAATTGGAAAACTGGGATGAACAAATTCTTGATCCATCTTCCAGAATTCCTATTTTGGATATAATAAAGCAAGAAGTTTCCCAAAGTAGCAGCTTGTATGGGCATGAAGAGTTTCAGGCTGATGGCTCATCTTGGTCAAATATGGTTCCAATTTCTTCCCCTAGGTCTTCTGTCACTAGTAGCTTCAGTAGTAATAATATACTGGATCTCACTTATAACAAGGTAGATCATAGGAAGATTAATCAACTTCCAGATCAAATATTTGAGTGTAATAGCACTGCCACTGTTGGAGTTAATAAGAAGGCTAGGGTTCAGCAATCTTCAAGCCAACAACCTCTTAAGGTGAGGAAGGAGAAGCTAGGTGATAGAATAACAGCACTTCACCAATTAGTTTCCCCATTTGGAAAGAGTGACACAGCTTCAGTGTTGTTAGAAGCCATTGGATATATCAGATTCCTGCAGAGTCAAATTGAGGCACACACTTCTCCTTACTTGGACAATAATGCCTCAGAAAACATGAGGAATCAAGATTATGTACATGGAGAAACAAATTCAATATTTCCTGAGGACCCTGGTCAGGATAGAGAAGTTAAGGTAAAGGAGTTGAGGAGTAGAGGGTTATGTTTGGTCCCTTTGTGTTGCACTCATCATGTTGGAAGTGAAAATGGAAATGATTATTGGTTACCCTTAAATGGCAGTGGATTTTAG 906 0.3985 MMAENPNWWSMHPASLIPPQYVLGSSSIPFNSLAENQEPPQSWSQLLFTGLHGEDESMGLSHFQSKKLENWDEQILDPSSRIPILDIIKQEVSQSSSLYGHEEFQADGSSWSNMVPISSPRSSVTSSFSSNNILDLTYNKVDHRKINQLPDQIFECNSTATVGVNKKARVQQSSSQQPLKVRKEKLGDRITALHQLVSPFGKSDTASVLLEAIGYIRFLQSQIEAHTSPYLDNNASENMRNQDYVHGETNSIFPEDPGQDREVKVKELRSRGLCLVPLCCTHHVGSENGNDYWLPLNGSGF* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g2102 301 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 170 219 IPR011598 GO:0046983
Lan6g2102 301 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 8 288 - -
Lan6g2102 301 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 180 230 IPR036638 GO:0046983
Lan6g2102 301 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 8 288 - -
Lan6g2102 301 CDD bHLH_AtbHLH_like 180 224 IPR045239 -
Lan6g2102 301 Gene3D - 167 243 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g2102 Lan-Chr6 31575856 31580017 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g2102 33 261 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 42.125 1.53e-42 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g2102 - - gmx:100802121 421.779