Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g2092 ATGGATTTTTGGCCAGAATATCTTGCTAGCAGTTGGGGTAGAGAATTTGTAGCAGGAGGAATTGGAGGCATTGCTGGTATAATATCTGGGTACCCATTGGATACAATTCGCATATTGCAGCAACAAAATTCTAACTTTGGTTCTGCTTTCACAATTCTTAGAAATGTTGTCGCTAAAGATGGTCCTGTTGCTCTTTATCGTGGCATGGCTGCACCTTTGGCTTCTGTTACTTTTCAGAATGCTATGGTTTTCCAAATTTATGCAGTTCTATCAAGGGCATTTTGCACATCAGTTTCTTCTAATGACCCTCCTTCCTTAAAGGGTGTTGCATTAGGAGGAGTTGGTACCGGTGCTCTCCAAAGTATGCTTCTCTCCCCCGTCGAGTTGGTTAAAATTCGCCTTCAGCTACAGAATACAGGTCAATCTTCACAATCCGTAAAGGGTCCTGTCAGGGTGGCAAAGAACATATGGAGAAATGAAGGCTTTCGCGGAATTTATCGAGGACTAGGCATTACTGTGCTTAGAGATGCACCTGCACATGGTTTATACTTCTGGACTTATGAGTACACAAGGGAAAAACTACATCCAGGTTGCCGAAAAAGTAGTCAAGAAAGCTTGAACACTATGTTAATAGCCGGAGGATTAGCCGGCGTATCGAGTTGGTTTTTCAGCTACCCTTTAGATGTTATAAAGACAAGATTGCAAGCACAATCACCTTCTTCATTGAAATACAAAGGCATTTTGGATTGCCTCAGAAAGAGCATCAATGAAGAAGGATACATTGTGCTATGGAGGGGTTTAGGAACTGCAGTTGCTAGAGCCTTTGTAGTGAATGGTGCTGTATTTTCTGCATATGAGATTACTCTGAGGTGTTTCTTTAACAATGGAAGCATTCAAGTATAG 903 0.4175 MDFWPEYLASSWGREFVAGGIGGIAGIISGYPLDTIRILQQQNSNFGSAFTILRNVVAKDGPVALYRGMAAPLASVTFQNAMVFQIYAVLSRAFCTSVSSNDPPSLKGVALGGVGTGALQSMLLSPVELVKIRLQLQNTGQSSQSVKGPVRVAKNIWRNEGFRGIYRGLGITVLRDAPAHGLYFWTYEYTREKLHPGCRKSSQESLNTMLIAGGLAGVSSWFFSYPLDVIKTRLQAQSPSSLKYKGILDCLRKSINEEGYIVLWRGLGTAVARAFVVNGAVFSAYEITLRCFFNNGSIQV* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g2092 300 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 1 294 - -
Lan6g2092 300 Gene3D Mitochondrial carrier domain 12 297 IPR023395 -
Lan6g2092 300 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 93 IPR018108 -
Lan6g2092 300 SUPERFAMILY Mitochondrial carrier 12 286 IPR023395 -
Lan6g2092 300 PRINTS Mitochondrial carrier protein signature 15 28 IPR002067 GO:0055085
Lan6g2092 300 PRINTS Mitochondrial carrier protein signature 28 42 IPR002067 GO:0055085
Lan6g2092 300 PRINTS Mitochondrial carrier protein signature 119 137 IPR002067 GO:0055085
Lan6g2092 300 PRINTS Mitochondrial carrier protein signature 166 184 IPR002067 GO:0055085
Lan6g2092 300 PRINTS Mitochondrial carrier protein signature 213 235 IPR002067 GO:0055085
Lan6g2092 300 ProSiteProfiles Solute carrier (Solcar) repeat profile. 104 193 IPR018108 -
Lan6g2092 300 PANTHER CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN 1 294 - -
Lan6g2092 300 Pfam Mitochondrial carrier protein 111 194 IPR018108 -
Lan6g2092 300 Pfam Mitochondrial carrier protein 208 295 IPR018108 -
Lan6g2092 300 Pfam Mitochondrial carrier protein 11 95 IPR018108 -
Lan6g2092 300 ProSiteProfiles Solute carrier (Solcar) repeat profile. 204 291 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g2092 Lan-Chr6 31521572 31524296 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g2092 1 295 Antiporters AT1G79900 70.508 2.49e-146 411
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g2092 K15109 - gmx:100801221 489.189