Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g2060 ATGGCTCTTATATCTCTCTCTCTTCTTCCCTCTCTTCTTCCACACTCTTCTTCTTCTTCTTCATGTGCTGGTGTGCTTCATTTCCGTTCCTATAACAACAACAATAACTTCGTTTCGATCAATTCATCTTCTTCTTCTTTCACTTCTTCAACTTCTAATCGAAATCGTAGTCGCCGCCGATTTCAGACGCTAGTTGTAGCTGCTTCCGGCGATTACTATGCTACTCTTGGAGTACCTAAATCTGCTACTGTTAAGGAAATTAAATCTGCTTATCGAAAGCTAGCTCGTCAGTACCATCCTGATGTGAACAAGGAACCTGGAGCTACTGACAAATTCAAAGAGATTAGTGCTGCATATGAGGTGCTATCAGATGATAAAAAGAGGGCTTTGTATGATCAATACGGTGAGGCTGGAGTTAAGAGCACAGTGGGAGGAGCATCAAGTGCCTATACGACTAATCCATTTGATTTATTTGAGACTTTTTTTGGGTCAAATATGGGTGGCTTTGCTGGCATGGATCCAACTGGATTTGGAACACAGCGTCGTAGTACCGTTACTAAGGGTGAAGACATCCGGTATGATTTCTCCTTGGATTTTTCTGAGGCAATTTTTGGAACAGAGAAAGAATTTGAGCTTTCCCATTTAGAAACATGTGAAGTCTGTACGGGTACAGGAGCAAAGATAGGCTCCAAGAAGAGAATATGTTCTACTTGTGGTGGGAGGGGTCAGGTGATGAGGACTGAGCAAACACCTTTTGGGTTGTTTTCACAGGTTTCAGTATGTCCAAATTGTGGAGGGAATGGTGAAGTCATATCTGAATATTGTCGTAAATGCAGCGGTGAAGGACGTTTACGGGTCAAGAAAAATATTAAAGTTAAAGTTCCTCCTGGGGTTAGCTCAGGCAGTATTCTAAGAGTTGCTAGGGAGGGTGATGCTGGACCAAGCGGGGGCCCGCCTGGAGATCTTTATGTATATCTCAATGTGGAAGAGATACCAGGAATTCAAAGAGATGACATAAATCTCCGCTCAACAATATCCATCAGTTATCTAGATGCCATAATAGGGGCTATTGTGAAGGTTAAGACAGTTGAAGGCACTTCTGAACTACAAATACCTCCTGGTACCCAACCTGGAGATGTCCTCGTCCTTGCAAGGAAAGGTGTACCAAAATTGAACAGACCATCAATACGTGGTGACCACTTATTTACAGTTAAAGTTACTATACCGAAACGGATTAGTACAAAGGAACGTGAATTGCTTGAAGAACTTGCTTCTCTAGGAAGTAGCGAAGGCCCTGCAGCTCAAAAGGCTGAAAGTCCAACTGAAACAGTTTCAGAAGAAATTGAACAAAAAGAGGACCAAAATGATATATGGAAGGCATTAAAGGACTTAGCTGGGTCCGTAGCAAATGGAGCTCTAAAGTGGCTGAAAGATAATCTCTAG 1443 0.4241 MALISLSLLPSLLPHSSSSSSCAGVLHFRSYNNNNNFVSINSSSSSFTSSTSNRNRSRRRFQTLVVAASGDYYATLGVPKSATVKEIKSAYRKLARQYHPDVNKEPGATDKFKEISAAYEVLSDDKKRALYDQYGEAGVKSTVGGASSAYTTNPFDLFETFFGSNMGGFAGMDPTGFGTQRRSTVTKGEDIRYDFSLDFSEAIFGTEKEFELSHLETCEVCTGTGAKIGSKKRICSTCGGRGQVMRTEQTPFGLFSQVSVCPNCGGNGEVISEYCRKCSGEGRLRVKKNIKVKVPPGVSSGSILRVAREGDAGPSGGPPGDLYVYLNVEEIPGIQRDDINLRSTISISYLDAIIGAIVKVKTVEGTSELQIPPGTQPGDVLVLARKGVPKLNRPSIRGDHLFTVKVTIPKRISTKERELLEELASLGSSEGPAAQKAESPTETVSEEIEQKEDQNDIWKALKDLAGSVANGALKWLKDNL* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g2060 480 ProSitePatterns Nt-dnaJ domain signature. 112 131 IPR018253 -
Lan6g2060 480 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 58 437 - -
Lan6g2060 480 Gene3D - 218 282 - -
Lan6g2060 480 ProSiteProfiles dnaJ domain profile. 71 135 IPR001623 -
Lan6g2060 480 Gene3D - 188 324 - -
Lan6g2060 480 CDD DnaJ 71 124 IPR001623 -
Lan6g2060 480 Gene3D DnaJ domain 68 173 IPR036869 -
Lan6g2060 480 ProSiteProfiles Zinc finger CR-type profile. 205 287 IPR001305 GO:0031072|GO:0051082
Lan6g2060 480 SUPERFAMILY HSP40/DnaJ peptide-binding domain 335 420 IPR008971 GO:0006457|GO:0051082
Lan6g2060 480 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 205 285 IPR036410 -
Lan6g2060 480 Hamap Chaperone protein DnaJ [dnaJ]. 68 464 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Lan6g2060 480 Pfam DnaJ central domain 218 282 IPR001305 GO:0031072|GO:0051082
Lan6g2060 480 SUPERFAMILY HSP40/DnaJ peptide-binding domain 186 329 IPR008971 GO:0006457|GO:0051082
Lan6g2060 480 CDD DnaJ_C 189 412 - -
Lan6g2060 480 SUPERFAMILY Chaperone J-domain 67 177 IPR036869 -
Lan6g2060 480 MobiDBLite consensus disorder prediction 424 452 - -
Lan6g2060 480 TIGRFAM DnaJ_bact: chaperone protein DnaJ 71 425 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Lan6g2060 480 Pfam DnaJ C terminal domain 191 409 IPR002939 -
Lan6g2060 480 PRINTS DnaJ domain signature 73 91 IPR001623 -
Lan6g2060 480 PRINTS DnaJ domain signature 91 106 IPR001623 -
Lan6g2060 480 PRINTS DnaJ domain signature 107 127 IPR001623 -
Lan6g2060 480 PRINTS DnaJ domain signature 127 146 IPR001623 -
Lan6g2060 480 Gene3D - 334 426 - -
Lan6g2060 480 SMART dnaj_3 70 127 IPR001623 -
Lan6g2060 480 Pfam DnaJ domain 71 132 IPR001623 -
Lan6g2060 480 CDD DnaJ_zf 218 282 IPR001305 GO:0031072|GO:0051082
Lan6g2060 480 PANTHER MOLECULAR CHAPERONE HSP40/DNAJ FAMILY PROTEIN 58 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g2060 Lan-Chr6 31256119 31263365 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g2060 72 134 C2H2 Transcription Factor Family AT1G74250 47.826 2.68e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g2060 K03686 - gmx:100798567 714.916