Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g2050 ATGGTGATAGAAATCATTGTGATGTACCCGATTCAGCACCGCAAGTATAGGAAAGGAATCGACAATCTTTTGGTGCTTCTCATCGGTGGGATTCCGATTGCTATGCCAACAGTTTTGTCAGTAACAATGGCTATTGGTTCCCATAGACTATCTGAGCAAGGTGCTATCACAAAGAGAATGACAGCCATTGAGGAAATGGCTGGAATGGATGTGTTATGTAGTGACAAAACCGGCACGCTAACATTGAACAAGCTTACAGTTGATAAGTCTTTGGTTGAGGTTTTTATTAAAGATGCTGATAAGGATACTGTAATTTTACTTGGAGCTAGGGCCTCTAGGGTAGAGAACCAAGATGCTATTGATGCTTGCATTGTTGGAATGTTGGGTGATCCAAAGGAGGCCAGAGATGGCATTACAGAGGTACATTTCCTTCCCTTTAATCCAGTGGACAAGCGTACAGCTATAACATACATAGACGCCGAGGGTAACTGGCACCGAGTTAGCAAAGGGGCACCCGAGCAGATTATAGAACTTTGCAATCTCAGGGAAGAGGTGAAGAGGAAAGCTATTTCCATTATTGATAAATTTGCTGAGCGCGGTCTTCGTTCTCTTGCTGTTTCCAGACAAGTAGTGCCAGAAAAGACCAAGGAGAGTGCAGGATCACCATGGCAATTTGTCGGGCTATTGCCTCTCTTTGATCCACCAAGACATGACAGTGCAGAGACCATTAGGCGCGCTCTCCATCTCGGAGTGAATGTTAAGATGATTACGGGTGATCAGCTAGCTATCGGAAAGGAAACTGGTAGAAGGCTTGGCATGGGAAGTAACATGTACCCTTCTTCATCCCTCCTTGGTCAGAATAAGGATGAGTCTGTTGCATCTCTTCCAATTGATGAACTTATAGAGAAAGCTGATGGTTTTGCTGGTGTTTTCCCTGAACACAAATATGAGATTGTGAAGAGACTCCAGGACAGGAAACACATATGTGGGATGACTGGTGACGGTGTGAATGATGCTCCTGCCTTGAAAAGGGCAGATATTGGAATTGCAGTGGCTGATGCAACCGATGCAGCTCGAGGTGCATCCGACATAGTCCTCACTGAGCCTGGTTTGAGTGTCATTGTGAGTGCAGTCTTGACAAGTAGAGCCATCTTTCAGAGGATGAAGAACTACACCATATACGCTGTTTCGATAACAATCCGAATTGTGCTCGGCTTTATGCTCATTGCTCTAATATGGAAATTTGATTTCTCACCTTTCATGGTTTTGGTAATTGCTATACTAAATGATGGCACCATCATGACCATTTCCAAGGACAGGGTTAAGCCGTCTCCATCGCCTGATTCATGGAAGCTGAAAGAAATTTTTAGCACAGGAGTAGTGCTTGGTGCCTACCTCGCTGTTATGACCGTTGTCTTCTTCTGGGCCGCTCATGCATCTAACTTCTTTTCGGACAAATTTGGTGTGAGATCCATCAGGGACAATGAGCATGAGCTCACAGCAGCGGTTTACCTTCAAGTGAGTATCGTAAGTCAGGCGCTCATTTTCGTTACAAGGTCAAGGAGCTGGTCTTACGTCGAACGCCCCGGTCTACTTCTGATTGTTGCCTTTTTTATAGCACAACTTATTGCCACAATCATAGCAGTGTATGCAAATTGGGGCTTTGCAAGGATCAAAGGAATTGGATGGGGTTGGGCTGGTGTAATTTGGCTCTACAGCATTGTTTTCTATATACCTTTGGATGTTCTTAAGTTCATCATTCGATATGCATTGAGTGGAAAGGCATGGAATAATGTTACTGAGAACAGGGTTGCTTTCACCTCAAAGAAAGATTATGGAAGGGGTGAGAGAGAAGCACAATGGGCTACAGCGCAACGCACACTCCATGGTCTCAACCCTCCTGGAACGGAAGAAATATTGAACGAAAAGAACGAGTATAGGGAATTGTCTGAACTTGCTGAACAAGCTAAGAAACGCGCCGAAGTTGCAAGGTTGAGAGAGCTTCACACACTGAAGGGACATGTTGAATCTGTTGTGAAACTCAAGGGACTTGACATTGAGACAATTCAGCAACATTACACTGTATAG 2088 0.4449 MVIEIIVMYPIQHRKYRKGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSEQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKSLVEVFIKDADKDTVILLGARASRVENQDAIDACIVGMLGDPKEARDGITEVHFLPFNPVDKRTAITYIDAEGNWHRVSKGAPEQIIELCNLREEVKRKAISIIDKFAERGLRSLAVSRQVVPEKTKESAGSPWQFVGLLPLFDPPRHDSAETIRRALHLGVNVKMITGDQLAIGKETGRRLGMGSNMYPSSSLLGQNKDESVASLPIDELIEKADGFAGVFPEHKYEIVKRLQDRKHICGMTGDGVNDAPALKRADIGIAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWKFDFSPFMVLVIAILNDGTIMTISKDRVKPSPSPDSWKLKEIFSTGVVLGAYLAVMTVVFFWAAHASNFFSDKFGVRSIRDNEHELTAAVYLQVSIVSQALIFVTRSRSWSYVERPGLLLIVAFFIAQLIATIIAVYANWGFARIKGIGWGWAGVIWLYSIVFYIPLDVLKFIIRYALSGKAWNNVTENRVAFTSKKDYGRGEREAQWATAQRTLHGLNPPGTEEILNEKNEYRELSELAEQAKKRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV* 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g2050 695 Pfam haloacid dehalogenase-like hydrolase 69 346 - -
Lan6g2050 695 SFLD p-type atpase 55 384 IPR044492 -
Lan6g2050 695 Gene3D - 332 590 - -
Lan6g2050 695 Gene3D - 1 77 - -
Lan6g2050 695 PRINTS P-type cation-transporting ATPase superfamily signature 73 87 - -
Lan6g2050 695 PRINTS P-type cation-transporting ATPase superfamily signature 227 238 - -
Lan6g2050 695 PRINTS P-type cation-transporting ATPase superfamily signature 249 259 - -
Lan6g2050 695 PRINTS P-type cation-transporting ATPase superfamily signature 332 351 - -
Lan6g2050 695 PRINTS P-type cation-transporting ATPase superfamily signature 355 367 - -
Lan6g2050 695 Coils Coil 639 666 - -
Lan6g2050 695 PANTHER CALCIUM-TRANSPORTING ATPASE 1 667 - -
Lan6g2050 695 SFLD Haloacid Dehalogenase 55 384 - -
Lan6g2050 695 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 307 420 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lan6g2050 695 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 1 550 IPR006534 GO:0008553|GO:0016021|GO:0120029
Lan6g2050 695 SUPERFAMILY Calcium ATPase, transmembrane domain M 3 591 IPR023298 -
Lan6g2050 695 PANTHER ATPASE 9, PLASMA MEMBRANE-TYPE 1 667 - -
Lan6g2050 695 ProSitePatterns E1-E2 ATPases phosphorylation site. 75 81 IPR018303 -
Lan6g2050 695 Gene3D - 85 232 IPR023299 GO:0000166
Lan6g2050 695 Gene3D - 644 695 - -
Lan6g2050 695 PRINTS H+-transporting ATPase (proton pump) signature 189 207 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lan6g2050 695 PRINTS H+-transporting ATPase (proton pump) signature 304 320 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lan6g2050 695 PRINTS H+-transporting ATPase (proton pump) signature 332 348 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lan6g2050 695 PRINTS H+-transporting ATPase (proton pump) signature 363 388 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lan6g2050 695 PRINTS H+-transporting ATPase (proton pump) signature 504 525 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lan6g2050 695 SUPERFAMILY HAD-like 69 379 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g2050 Lan-Chr6 31193407 31198855 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g2050 1 695 Primary Pumps ATPases AT2G07560 84.029 0.0 1213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g2050 K01535 - gmx:100782329 1266.91