Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g2040 ATGAAGGCCCAAACACTGAAAACCCTAATAGTTATATATCTTATGCGCCTCTTTGTAGAAATAGAAACCCTAGCGCCAAATTCCCATTCCAAATCGCTTATCATTTCCATCGAATTTTTTGAATCAGATATGAAGGTTATCGCTGCTTATTTGTTGTCCGTTTTGGGAGGGAACGAAACCCCTTCATCTCATGATCTCAAAACTATCCTTGCCTCAGTTGGAGCCGAGGCTGAGGAGGCAAAGATTGAGCTGCTCTTGAACGAAGTGAAGGGCAAAAGTGTTGTTGAACTAATTGCTAGTGGAAGAGAGAAGTTGGCTTCAGTACCTTCCGGAGGTGGTGCAGTTGCTGTAGCTGCTGCACCTGCAGGAGGTGCTGGTGGTGCTGCTGCACCTGCTGCCGAAGCAAAGGAGGAGAAGAAGGTGGAAGAGAAAGAGGAATCCGATGATGATATGGGCTTCAGTTTATTTGACTAA 474 0.4557 MKAQTLKTLIVIYLMRLFVEIETLAPNSHSKSLIISIEFFESDMKVIAAYLLSVLGGNETPSSHDLKTILASVGAEAEEAKIELLLNEVKGKSVVELIASGREKLASVPSGGGAVAVAAAPAGGAGGAAAPAAEAKEEKKVEEKEESDDDMGFSLFD* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g2040 157 MobiDBLite consensus disorder prediction 133 147 - -
Lan6g2040 157 CDD Ribosomal_P2 44 157 IPR044076 GO:0002182|GO:0003735|GO:0022625
Lan6g2040 157 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 27 157 IPR044076 GO:0002182|GO:0003735|GO:0022625
Lan6g2040 157 MobiDBLite consensus disorder prediction 123 157 - -
Lan6g2040 157 Gene3D - 43 102 IPR038716 -
Lan6g2040 157 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P2A-LIKE 27 157 - -
Lan6g2040 157 Hamap 50S ribosomal protein L12 [rpl12]. 45 157 IPR027534 GO:0003735|GO:0005840|GO:0006414
Lan6g2040 157 Pfam 60s Acidic ribosomal protein 61 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g2040 Lan-Chr6 31133190 31134993 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g2040 44 113 Cytoplasmic Ribosomal Protein Gene Family AT2G27710 72.857 1.19e-29 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g2040 K02943 - han:110868556 113.235