Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g2039 ATGGAGCCATGGCTCGATGATCTAAACGACGACCTTCAAAGCCTTAGCTTCGCTTCTTCCACCACCGCAGAGATCAAACGTAGCACCAGCTTCAGCTCCGAAACCACCACCATAACCGCTTCCACCTCCGCCCACCTCCCACCAACTCCGACCACCAAACACCACGCGCCCTCCTCCGACCCTCGCTGGTCCGCCATCCGCCGGATCCGCTCAGAGTCCCCAACCCGCCGCATCCTCCCGTCCGACATCCGCTTCAAACGCCGCCTCGGCGCCGGAGACATAAGCTCCGTGTACTTAGCCGAAGTTAACGATGGTTCGGCGATGTTCGCGGCGAAGGTGATGGATAAGAAGGAATTAGCGAGTAGGAGTAAGGAAGGGAGGGCGAGGACAGAAAGGGAAATACTTGAATTGTTGGATCATCCTTTTCTTCCAACTCTTTATGCTACCATTGATGCGCCCAAATGGTTTTCTCTCCTTACTGAGTTTTGCCCCGGCGGCGACCTCCACGTCCTCCGTCAACGCCACCCTAACAAACGCTTCCTTCAAACCGCTGTCAGATTCTATGCTTCAGAAGTGTTAGTAGCACTTGAATACCTTCACATGTTAGGTATAGTCTACCGTGACCTTAAACCTGAGAATGTTTTGGTTCGATCAGATGGTCACATCATGCTCACTGATTTTGATCTCTCCTTAAAATGTAATGATTCCACCCCATTGGCTCAGATCAAACCTGATCAAAAGTCTCCTCACATAGCCCCACACCATATTGAACCCTCTCATTTCACTTCATCAAAATGCATATTACCCAATTGTATAGTCCCAGCAGTTTCATGTTTCCACCCAAAACGCAAGAGGAAGAAGCAAAACCAACATAATGGCCCTGAGTTTGTGACTGAACCCATTGATATAAGGTCCATGTCTTTTGTTGGGACCCATGAATACTTGGCTCCAGAGATTGTGTCTGGTGAGGGACATGGTAGTGCTGTGGATTGGTGGACTTTAGGGATATTCATATTTGAGTTGTTTTATGGTGTCACACCCTTTAGGGGCATGGATAATGAGTTAACCTTAGCAAATATTGTAGCTAGAGCCCTTGAGTTCCCTAAGGAACCCTTTGTGCCTGCCAATGCTAAGGACCTTATCTCACAGTTATTGGTTAAGGACCCATCAAGGAGGTTAGGGTCAACAATGGGGGCTTCAACAATTAAGCACCATTCGTTTTTTCAAGGTGTGAGTTGGGCATTGCTAAGGTGTACAACACCTCCATTTGTGCCTCCACCTTTTGCTAAAGATAAAGATGCTGTATCTGATGAAAGTTGTTGTCCTGAGACTATAATTGATTATTATTGA 1350 0.477 MEPWLDDLNDDLQSLSFASSTTAEIKRSTSFSSETTTITASTSAHLPPTPTTKHHAPSSDPRWSAIRRIRSESPTRRILPSDIRFKRRLGAGDISSVYLAEVNDGSAMFAAKVMDKKELASRSKEGRARTEREILELLDHPFLPTLYATIDAPKWFSLLTEFCPGGDLHVLRQRHPNKRFLQTAVRFYASEVLVALEYLHMLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCNDSTPLAQIKPDQKSPHIAPHHIEPSHFTSSKCILPNCIVPAVSCFHPKRKRKKQNQHNGPEFVTEPIDIRSMSFVGTHEYLAPEIVSGEGHGSAVDWWTLGIFIFELFYGVTPFRGMDNELTLANIVARALEFPKEPFVPANAKDLISQLLVKDPSRRLGSTMGASTIKHHSFFQGVSWALLRCTTPPFVPPPFAKDKDAVSDESCCPETIIDYY* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g2039 449 Gene3D Phosphorylase Kinase; domain 1 82 166 - -
Lan6g2039 449 Gene3D Transferase(Phosphotransferase) domain 1 167 238 - -
Lan6g2039 449 MobiDBLite consensus disorder prediction 28 58 - -
Lan6g2039 449 SUPERFAMILY Protein kinase-like (PK-like) 62 433 IPR011009 -
Lan6g2039 449 SMART serkin_6 83 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g2039 449 PANTHER FLIPPASE KINASE 1-RELATED 1 449 - -
Lan6g2039 449 Gene3D Transferase(Phosphotransferase) domain 1 304 426 - -
Lan6g2039 449 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Lan6g2039 449 PANTHER OS11G0150700 PROTEIN 1 449 - -
Lan6g2039 449 MobiDBLite consensus disorder prediction 28 62 - -
Lan6g2039 449 ProSiteProfiles Protein kinase domain profile. 83 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g2039 449 Pfam Protein kinase domain 305 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g2039 449 Pfam Protein kinase domain 85 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g2039 Lan-Chr6 31126775 31131252 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g2039 1 449 AGC Kinase Gene Family AT3G44610 61.966 0.0 549
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lan6g2039 Pkinase 5.1e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g2039 K08286 - gmx:100792738 719.153