Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g2032 ATGGAGTTTTGGGGTACTGAGGTTAAGGTTGGTGAGACTGTTAAGATTGACCCAGAAGAAATTGAGGCCTATGTTCATCTTTCTCAGGCTGCTCTTGGCGAGTCTAAGAAAGACAAAGCTAATGAACCTGTGTTTCTTCACTTGAAAGTTGGTGAACAGAAACTTGTTTTGGGAACTCTTTCCAGGGATAAAATCCCTCAGGCATCTCTTGATGTTGTTCTTGACACAGAGTTTGAGCTTTCCCACAGTTCAAAGAGTTCCAGTGTCTTCTTCACTGGATACAAGGCACTTATTCCTGATGAAGATGGTGATGAGGATGACTTTGATTCTGATGAGGATCTCCCTTTGCCTGCCGAAGAAAATGGAAAATCTTTAGTAAAAGCGGAAGAAGCAAAGGTTGCAGAACCTAAAAAGGCTGATGCCAAGGTTGGTGTGCCAGCAAAACAGGTCAAGATTGCTGATCCCAAGAAAGAAGAGAATGCAGATGATGATGATTCCGATGAGGATGATGATGATGATTCCGATGATTTTGGAAGTTCTGATGATGAGTTGGATGATGCTGACAGTGATGGCGATGAGGAAGATGATAGTGAAGATGATGTAGAGACCCCTCCTAAGAAGGTGGAACTTGGAAAGAAAAGGGCCAATGATTCTGCATCAAAAACTCCAGTTTCTAACAAAAAAGCTAAAAATGTTACTCCTGAAAAGACCGATGGTAAGAAAGGTGGACATATAGCTACTCCCCACCCTGCAAAGAAAGGTGGAAAGTCTCCTAACAATGATGGCAAGAGTCAATCCCCGAAGTCTGGCGGACAATCCGGGCGAGGTGGTTTTAAGGGTCAGTCCCCGAAGTCTGGCGGACAATCCGGACAATCCGGGCGCGGTGGTTTTAAGAAGTCTTTCAACTCTGGTGGTGGTAGTCAACAAAACAACTCTGGAGGTGGTCGTCAACAAAACAACAATGCTAGGCGTGGCAAGTGA 981 0.4455 MEFWGTEVKVGETVKIDPEEIEAYVHLSQAALGESKKDKANEPVFLHLKVGEQKLVLGTLSRDKIPQASLDVVLDTEFELSHSSKSSSVFFTGYKALIPDEDGDEDDFDSDEDLPLPAEENGKSLVKAEEAKVAEPKKADAKVGVPAKQVKIADPKKEENADDDDSDEDDDDDSDDFGSSDDELDDADSDGDEEDDSEDDVETPPKKVELGKKRANDSASKTPVSNKKAKNVTPEKTDGKKGGHIATPHPAKKGGKSPNNDGKSQSPKSGGQSGRGGFKGQSPKSGGQSGQSGRGGFKKSFNSGGGSQQNNSGGGRQQNNNARRGK* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g2032 326 MobiDBLite consensus disorder prediction 201 216 - -
Lan6g2032 326 Pfam Nucleoplasmin-like domain 3 94 IPR041232 -
Lan6g2032 326 PANTHER 32 KDA HEAT SHOCK PROTEIN-RELATED 1 274 - -
Lan6g2032 326 Gene3D Nucleoplasmin core domain 1 99 - -
Lan6g2032 326 PANTHER HISTONE DEACETYLASE HDT3-LIKE ISOFORM X1 1 274 - -
Lan6g2032 326 MobiDBLite consensus disorder prediction 100 115 - -
Lan6g2032 326 MobiDBLite consensus disorder prediction 258 326 - -
Lan6g2032 326 MobiDBLite consensus disorder prediction 160 200 - -
Lan6g2032 326 MobiDBLite consensus disorder prediction 100 326 - -
Lan6g2032 326 MobiDBLite consensus disorder prediction 123 144 - -
Lan6g2032 326 MobiDBLite consensus disorder prediction 231 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g2032 Lan-Chr6 31074413 31077149 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g2032 1 311 C2H2 Transcription Factor Family AT5G03740 37.160 9.33e-39 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g2032 - - lang:109351133 400.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g2032 6 31074413 31077149 Lan10g0163 10 1065766 1068531 LSH
Lan6g2032 6 31074413 31077149 Lan3g0116 3 807707 811695 LSH
Lan6g2032 6 31074413 31077149 Lan7g0343 7 2352254 2355423 PCT
Lan6g2032 6 31074413 31077149 Lan8g1623 8 23199974 23202386 PCT
Lan7g0343 7 2352254 2355423 Lan6g2032 6 31074413 31077149 PCT
Lan8g1623 8 23199974 23202386 Lan6g2032 6 31074413 31077149 PCT