Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g2029 ATGGCGGAGGACCGAAATGAAGGGAGTGATTACAGTTCAGAAGAGGAAGGAACTGAAGATTATAGGCGCGGAGGGTACCATGCGGTTCAAATTGGCGATACTTTCAAGAATGGTTGCTATGTGGTGCAGAGAAAACTCGGTTGGGGTCATTTTTCCACTGTGTGGCTTGCTTGGGATACTCAGAAATTGCGGTATGTTGCCCTAAAAATTCAAAAGAGTGCTCAGCACTACACAGAAGCAGCAATGGATGAAATAAAGATTCTTAAGCAGATTGCAGAGGGGGATCCAGAGGACAAGAAATGTGTTGTCAAGCTATTGGACCACTTTAAGCATTCAGGGCCCAATGGCCAGCATGTGTGTATGGTTTTTGAATTCCTAGGTGACAATCTTCTTACCCTTATAAAGTACAGTGATTATCGAGGGGTTCCCCTTCCCATGGTTAAAGAAATTTGTTTCCATATTTTGGCTGGTTTGGATTACTTGCATCGCGAGCTCTCTATAATACACACTGATTTGAAGCCAGAGAATGTCTTGCTTCTGTCTCCAATAGACCCATCTAAGGATCCAAAAAAATCAGGTGTTCCACTTGTCATTCCAAACACCAAGGACAAGACTGTGCCCAAGATTGGGACCGCAAAATATGATAAAAGCTTGTATGGAGATCTGACCAAGAACCAGAAAAAGAAAATTCGGAAAAAGGCTAAAAAGGCAACTCAATGCAGTGTTGGGAAGGAAAGTACCGAGGAAGCTGAGGAGGATTCTAAAGCACCTGAGCAAGATGATTGTAGTAATGATGCCAAACCAAGTGTAGAATCTGGTGAAGGTAAACCTAATAGTCCTGTGAGTAAAGATGGATCAACAAAGGCTTCTGAAACTGAGGATGTTCCACAAGGAAGTCATGATCATAGGAGAGTAAGCAGTTCTACAAGAAAAAAGTTGCTGGCAGCTGTTGATCACAAGTGCAAGCTTGTTGATTTTGGTAATGCTTGTTGGACTTATAAACAATTCACAAATGATATTCAGACGAGGCAGTACCGGTGCCCCGAGGTTATTCTTGGATCTAAATACTCAACTCCAGCAGATCTATGGTCTTTTGCTTGCATTTGCTTTGAGCTTGTCACTGGTGATGTTCTTTTTGACCCCCACAGTGGTGACAACTATGATAGGGATGAGGATCATCTGGCATTGATGATGGAGCTTGTTGGTATGATGCCTCGCAAGATTGCACTAGGTGGTCGCTATTCCCGGGAGTTTTTCAACAGATCTGGTGATTTGAGGCACATCCGCAGGTTGCGTTTCTGGCCTCTTAATAAGGTGTTGACAGAGAAGTATGATTTCAGTGAGCAAGAAGCAAATAATATGGCTGATTTCCTTGTTCCATTACTCGATTTTGTCCCTGAAAAGAGACCAACAGCTGCTCAGTGTCTTAGCCATCCATGGTTCAGTGCAGGTCCTCGGACTCTTGAACCCTCCTTGACTACTACTGTGCAACCTGATGCTATGGATGTGGAGATGTCTGAAAAGATGAAGAGAGAAAAAGCTGAGAAGGAGGCTGTGGAAGTTGGTATGGGGAACATAGCTATTAGTGGAACTCTGAAGCCACTCAAAGAGTCCCAACCAATAAGGTCGTGA 1632 0.4363 MAEDRNEGSDYSSEEEGTEDYRRGGYHAVQIGDTFKNGCYVVQRKLGWGHFSTVWLAWDTQKLRYVALKIQKSAQHYTEAAMDEIKILKQIAEGDPEDKKCVVKLLDHFKHSGPNGQHVCMVFEFLGDNLLTLIKYSDYRGVPLPMVKEICFHILAGLDYLHRELSIIHTDLKPENVLLLSPIDPSKDPKKSGVPLVIPNTKDKTVPKIGTAKYDKSLYGDLTKNQKKKIRKKAKKATQCSVGKESTEEAEEDSKAPEQDDCSNDAKPSVESGEGKPNSPVSKDGSTKASETEDVPQGSHDHRRVSSSTRKKLLAAVDHKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVILGSKYSTPADLWSFACICFELVTGDVLFDPHSGDNYDRDEDHLALMMELVGMMPRKIALGGRYSREFFNRSGDLRHIRRLRFWPLNKVLTEKYDFSEQEANNMADFLVPLLDFVPEKRPTAAQCLSHPWFSAGPRTLEPSLTTTVQPDAMDVEMSEKMKREKAEKEAVEVGMGNIAISGTLKPLKESQPIRS* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g2029 543 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 8 540 - -
Lan6g2029 543 MobiDBLite consensus disorder prediction 225 309 - -
Lan6g2029 543 SMART serkin_6 40 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g2029 543 Gene3D Phosphorylase Kinase; domain 1 16 122 - -
Lan6g2029 543 PANTHER SERINE KINASE-LIKE PROTEIN 8 540 - -
Lan6g2029 543 MobiDBLite consensus disorder prediction 182 202 - -
Lan6g2029 543 Pfam Protein kinase domain 40 179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g2029 543 Pfam Protein kinase domain 317 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g2029 543 CDD STKc_SRPK 29 481 - -
Lan6g2029 543 SUPERFAMILY Protein kinase-like (PK-like) 35 496 IPR011009 -
Lan6g2029 543 MobiDBLite consensus disorder prediction 1 23 - -
Lan6g2029 543 Gene3D Transferase(Phosphotransferase) domain 1 123 482 - -
Lan6g2029 543 MobiDBLite consensus disorder prediction 287 304 - -
Lan6g2029 543 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
Lan6g2029 543 ProSitePatterns Protein kinases ATP-binding region signature. 46 69 IPR017441 GO:0005524
Lan6g2029 543 MobiDBLite consensus disorder prediction 245 267 - -
Lan6g2029 543 ProSiteProfiles Protein kinase domain profile. 40 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g2029 Lan-Chr6 31029009 31033574 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g2029 1 531 EF-hand Containing Proteins AT5G22840 69.017 0.0 738
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Lan6g2029 Pkinase 2.8e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g2029 K08832 - gmx:100809984 935.636
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g2029 6 31029009 31033574 Lan10g0157 10 1020938 1024260 LSH
Lan6g2029 6 31029009 31033574 Lan3g0105 3 739114 743750 LSH