Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g2019 ATGACAGATAAAAATGAAATAACAGCAGATTCTTCATCTGACAGTGATTTCACCAACCAATGGTCTATTGAGCTTTCTGAGTACTTAAAGTTTGATGGTAATAATGAATGGGTGGTTGATGATGATCCTGGTTCATTTGTTTCTGAACATGTTTCAACCCAAGTTGTATATGATCAAGCCAATGTTGTTAGTGACTTTGGAGAAGGTGGCATTCACTTTGAAGGTTCTTCTTCTACAAGAGAAATTAGCAGTGTAGAAGAGAAGAAAGTTAGAAAGAAATTTTCATTCAAAACAAAGTCAGAGGTTGAAATCCTTGATGATGGATACAAGTGGAGAAAATATGGAAAGAAGATGGTGAAGAACAGTCCAAATCCAAGGCATTACTATAGGTGTTCAGTGGAAGGATGTCCTGTAAAAAAGACAGTAGACAGAGATAGGGATGATTCAAGATATGTAATAACAACCTATGAAGGAACTCACACTCACCCAAGGTAG 495 0.3657 MTDKNEITADSSSDSDFTNQWSIELSEYLKFDGNNEWVVDDDPGSFVSEHVSTQVVYDQANVVSDFGEGGIHFEGSSSTREISSVEEKKVRKKFSFKTKSEVEILDDGYKWRKYGKKMVKNSPNPRHYYRCSVEGCPVKKTVDRDRDDSRYVITTYEGTHTHPR* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g2019 164 Gene3D WRKY domain 89 164 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan6g2019 164 Pfam WRKY DNA -binding domain 106 163 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan6g2019 164 SUPERFAMILY WRKY DNA-binding domain 98 163 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan6g2019 164 ProSiteProfiles WRKY domain profile. 100 164 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan6g2019 164 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 1 163 IPR044810 GO:0003700
Lan6g2019 164 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 163 - -
Lan6g2019 164 SMART WRKY_cls 105 164 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g2019 Lan-Chr6 30945708 30946862 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g2019 93 162 WRKY Transcription Factor Family AT5G26170 75.714 5.29e-38 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan6g2019 WRKY 1.6e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g2019 - - lang:109358189 214.542