Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g2017 ATGGAGGAGGTTTCGTTTGCGGTTGCGGTGGCATTAAGAGTAGGTAATTTAGTCTGTGATAATAATCGAACTGTAGCTACTACCCACATGGATGTATCAAGGTTTAAGCTCATGGAAGATGCTGGGTTGTTAACTGATTCTGTAACTAAGGTAGAGACGGTAGCAAGTTCTGATGATCGTCATAAGCAAGTTGGTATTGTAGAAGTCGTGTCACCAAAACAGGATAGGGAAGGAGATATTCCTTTGTCGGACACAATGTCTCAAAATAAAAGCAGCGTTTTGGATCCTGGTGATGATGTATTAGTCCATGAAGTTGAGGAGGATAATTCGTTGTCATTGGAAGGTGACCAGATAATTGATAGTTCATGTTCTCATTCGGCAGTGAGTGAGAACAGTAGCATGTGTGATGAGGAGTTCATCAATTTTGAGGCCAATTCAGATGTTGGAACACCGTGTTCCCTGGACATAGATAAGAGTGTTTGTGGTGTCAATATTGTTGCCCAGCCTGCTGATTTGCCGGAATCAAATGTTGTGACAGATATTATGAGTGAACCCCTTGCAGTTGCAGGCAGCCTTGAAGAAGATACCGGAGTAGGGTCTGTCCCCGAGCCGTCTGCAACTGGTCTTCATCAGCAAGAAAAAGGGGTGAGTGGAACAGTTGGGCGGAGCGTTTTTGAATTGGACTATGCCCCACTTTGGGGATTTATATCTCTTTGTGGAAGAAGACCAGAGATGGAAGATGCATTTACAACTGTACCTCGATTTTTGAAAATTCCTATTCAAATGCTAATTGGTGACCGGGTTCTTGATGGAATGAACAAATGTTTCAATCAGCAGATGATTCATTTCTTTGGAGTTTATGATGGCCATGGTGGTTCTCAGGTGGCAAATTATTGTCGTGATCGTATCCATTTAGCCTTGGCTGAGGAAATAGAACTTGTCAAGGAAGGTCTAATTAGTGGAAGTATGGTGGATGGTTGTCTAGATAGGTGGAAAAAAGCTTTTACCAATTGTTTCTTGAAGGTTGATGCCGAAGTTGGAGGAAAAGTTAATAATGAACCTGTTGCTCCAGATACTGTTGGTTCCACGGCTGTTGTTGCTATTATCTGTGCATCTCATATCATAATCGCGAACTGTGGTGATTCAAGAGCGGTTCTTTGTCGTGGCAAGGAACCGATGGCATTATCAGTGGACCATAAACCTAATCGAGATGACGAATATGCAAGAATCGAGGCAGCTGGTGGAAAGGTGATACAATGGAATGGATATCGTGTATGTGGTGTTCTTGCAATGTCACGGTCTATTGGTGATAGATATTTGAAACCGTGGATTATTCCAGAACCAGAAGTTATGTTTCTTCCTCGTGCGAAAGATGACGAGTGTCTTATTCTGGCCAGTGATGGTCTGTGGGATGTCATGACGAATGAAGAGGTCTGTGACCTTGCTCGGAGACGGTTACTTCTCTGGCACAAGAAAAATGGATCAGAACTACCCCCAGAGAGGGGAAAGGGAGTTGATCCTGCCGCACAAGCAGCAGCAGAGTACCTAGCGCACCGTGCTCTTCAGAAAGGAAGCAAAGATAACATCACCGTCATCGTAGTGGATTTAAAAGCTCAGAGAAAATTCAAGAGCAAGACATGA 1641 0.4357 MEEVSFAVAVALRVGNLVCDNNRTVATTHMDVSRFKLMEDAGLLTDSVTKVETVASSDDRHKQVGIVEVVSPKQDREGDIPLSDTMSQNKSSVLDPGDDVLVHEVEEDNSLSLEGDQIIDSSCSHSAVSENSSMCDEEFINFEANSDVGTPCSLDIDKSVCGVNIVAQPADLPESNVVTDIMSEPLAVAGSLEEDTGVGSVPEPSATGLHQQEKGVSGTVGRSVFELDYAPLWGFISLCGRRPEMEDAFTTVPRFLKIPIQMLIGDRVLDGMNKCFNQQMIHFFGVYDGHGGSQVANYCRDRIHLALAEEIELVKEGLISGSMVDGCLDRWKKAFTNCFLKVDAEVGGKVNNEPVAPDTVGSTAVVAIICASHIIIANCGDSRAVLCRGKEPMALSVDHKPNRDDEYARIEAAGGKVIQWNGYRVCGVLAMSRSIGDRYLKPWIIPEPEVMFLPRAKDDECLILASDGLWDVMTNEEVCDLARRRLLLWHKKNGSELPPERGKGVDPAAQAAAEYLAHRALQKGSKDNITVIVVDLKAQRKFKSKT* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g2017 546 ProSitePatterns PPM-type phosphatase domain signature. 283 291 IPR000222 GO:0043169
Lan6g2017 546 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 98 546 - -
Lan6g2017 546 SUPERFAMILY PP2C-like 228 537 IPR036457 -
Lan6g2017 546 SMART PP2C_4 218 534 IPR001932 -
Lan6g2017 546 CDD PP2Cc 237 536 IPR001932 -
Lan6g2017 546 Gene3D - 219 546 IPR036457 -
Lan6g2017 546 PANTHER ALPHABET, ISOFORM E-RELATED 98 546 - -
Lan6g2017 546 MobiDBLite consensus disorder prediction 75 96 - -
Lan6g2017 546 Pfam Protein phosphatase 2C 267 529 IPR001932 -
Lan6g2017 546 ProSiteProfiles PPM-type phosphatase domain profile. 232 536 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g2017 Lan-Chr6 30937157 30940257 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g2017 1 546 PP2C-type Phosphatase Gene Family AT1G17550 47.038 8.36e-163 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g2017 K14497 - gmx:100805281 834.713